RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR2L8Q8NGY9 312 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 DNAJB14Q8TBM8 379 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 C1orf54Q8WWF1 131 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 ETNK1Q9HBU6 452 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 SLC22A11Q9NSA0 550 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 LUZP4Q9P127 313 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 CDYLQ9Y232 598 aa12.07□□□□□ -0.48
VEGFA-216ENST00000512683 PRRC2CQ9Y520 2896 aaKnown RBP12.07□□□□□ -0.48
VEGFA-216ENST00000512683 OR51F1A6NGY5 319 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 DSCR3O14972 297 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 HCRTR1O43613 425 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 APOA4P06727 396 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 EDN3P14138 238 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 FDXRP22570 491 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 DCTP40126 519 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 EMP3P54852 163 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 SNX1Q13596 522 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 NKG7Q16617 165 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 CCDC38Q502W7 563 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 SEL1L2Q5TEA6 688 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 HIST2H2BCQ6DN03 193 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 PRMT9Q6P2P2 845 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 FIGLAQ6QHK4 219 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 ZNF662Q6ZS27 426 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 TTLL10Q6ZVT0 673 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 CUZD1Q86UP6 607 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 KCNMB4Q86W47 210 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 DCUN1D3Q8IWE4 304 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 RAB42Q8N4Z0 105 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 DNAAF3Q8N9W5 541 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 TTC29Q8NA56 475 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-216ENST00000512683 OR13J1Q8NGT2 312 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 OR4L1Q8NH43 312 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 HDAC10Q969S8 669 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 RAD51AP1Q96B01 352 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 NRTNQ99748 197 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 LHPPQ9H008 270 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 EPS8L2Q9H6S3 715 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-216ENST00000512683 ZNF148Q9UQR1 794 aa12.06□□□□□ -0.48
VEGFA-216ENST00000512683 MED13Q9UHV7 2174 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 CCDC88CQ9P219 2028 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 A1L4Q6 167 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 VSTM2BA6NLU5 285 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 GOLGA6L6A8MZA4 724 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 AP3B1O00203 1094 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 CNOT3O75175 753 aaKnown RBP12.05□□□□□ -0.48
VEGFA-216ENST00000512683 CLDN1O95832 211 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 RNF224P0DH78 156 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 MAGP20916 626 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 CCR7P32248 378 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 HSPA14Q0VDF9 509 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 BRD3Q15059 726 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 TMED2Q15363 201 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 RPS6KA1Q15418 735 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 SF1Q15637 639 aaKnown RBP12.05□□□□□ -0.48
VEGFA-216ENST00000512683 FASTKD1Q53R41 847 aaKnown RBP12.05□□□□□ -0.48
VEGFA-216ENST00000512683 TSTD2Q5T7W7 516 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 KIRREL2Q6UWL6 708 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 LRRC6Q86X45 466 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 MPP5Q8N3R9 675 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 LMNTD1Q8N9Z9 388 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 LINC01555Q8NAE3 123 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 GSDMBQ8TAX9 411 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 HMGCLL1Q8TB92 370 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 MAGEC3Q8TD91 643 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 FAR1Q8WVX9 515 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 ZNF778Q96MU6 729 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 PANX3Q96QZ0 392 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 SPSB2Q99619 263 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 MENTQ9BUN1 341 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 RUBCNLQ9H714 662 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 SLC6A20Q9NP91 592 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 CUTCQ9NTM9 273 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 SLC2A6Q9UGQ3 507 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 CDC23Q9UJX2 597 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 ANAPC5Q9UJX4 755 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 FBXL4Q9UKA2 621 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 SLC39A10Q9ULF5 831 aa12.05□□□□□ -0.48
VEGFA-216ENST00000512683 FER1L5A0AVI2 2057 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 A0A1B0GUH1 482 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 SOCS6O14544 535 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 PRMT5O14744 637 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-216ENST00000512683 RASGRF2O14827 1237 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 PRICKLE3O43900 615 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-216ENST00000512683 PHF2O75151 1096 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 GOT2P00505 430 aaKnown RBP12.04□□□□□ -0.48
VEGFA-216ENST00000512683 IFNB1P01574 187 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 ZSCAN5DPP0CG00 497 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 AOAHP28039 575 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 PEBP1P30086 187 aaKnown RBP12.04□□□□□ -0.48
VEGFA-216ENST00000512683 RPL22P35268 128 aaKnown RBP12.04□□□□□ -0.48
VEGFA-216ENST00000512683 CCNFP41002 786 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 TTPAP49638 278 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 AP2B1P63010 937 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 PRAMEP78395 509 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 ZNF169Q14929 603 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-216ENST00000512683 SLC9A5Q14940 896 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 CCNG2Q16589 344 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 DEFB110Q30KQ9 67 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms