RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC3-207ENST00000497251 ANAPC5Q9UJX4 755 aa16.17■□□□□ 0.18
TRAPPC3-207ENST00000497251 DUSP10Q9Y6W6 482 aa16.17■□□□□ 0.18
TRAPPC3-207ENST00000497251 SNRNP200O75643 2136 aaKnown RBP16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 ABCA12Q86UK0 2595 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 A1L4Q6 167 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 FITM1A5D6W6 292 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 PCDH17O14917 1159 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 CNOT3O75175 753 aaKnown RBP16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 RNF224P0DH78 156 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 MAGP20916 626 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 CARSP49589 748 aaKnown RBP16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 TTPAP49638 278 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 PRAMEP78395 509 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 HSPA14Q0VDF9 509 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 KIF5AQ12840 1032 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 TLR1Q15399 786 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 NKG7Q16617 165 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 FASTKD1Q53R41 847 aaKnown RBP16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 TSTD2Q5T7W7 516 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 RPUSD3Q6P087 351 aaKnown RBP16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 PRMT9Q6P2P2 845 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 FIGLAQ6QHK4 219 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 TTLL10Q6ZVT0 673 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 CUZD1Q86UP6 607 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 MPP5Q8N3R9 675 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 GSDMBQ8TAX9 411 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 MAGEC3Q8TD91 643 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 RAD51AP1Q96B01 352 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 PANX3Q96QZ0 392 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 TMEM121Q9BTD3 319 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 MENTQ9BUN1 341 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 LHPPQ9H008 270 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 SLC22A11Q9NSA0 550 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 CUTCQ9NTM9 273 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 CDC23Q9UJX2 597 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 FBXL4Q9UKA2 621 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 ZGRF1Q86YA3 2104 aa16.16■□□□□ 0.18
TRAPPC3-207ENST00000497251 CELSR2Q9HCU4 2923 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 GRID2IPA4D2P6 1211 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 AP3B1O00203 1094 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 PRMT5O14744 637 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 GOT2P00505 430 aaKnown RBP16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 EDN3P14138 238 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 PEBP1P30086 187 aaKnown RBP16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 CCR7P32248 378 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 DCTP40126 519 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 SF1Q15637 639 aaKnown RBP16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 TUBB8Q3ZCM7 444 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 HIST2H2BCQ6DN03 193 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 LRRC6Q86X45 466 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 TICAM1Q8IUC6 712 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 LMNTD1Q8N9Z9 388 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 LINC01555Q8NAE3 123 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 OR52K1Q8NGK4 314 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 OR6P1Q8NGX9 317 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 HMGCLL1Q8TB92 370 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 SPSB2Q99619 263 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 SLC6A20Q9NP91 592 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 SLC39A10Q9ULF5 831 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 FAM169AQ9Y6X4 670 aa16.15■□□□□ 0.18
TRAPPC3-207ENST00000497251 CRYBG3Q68DQ2 2970 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 VSTM2BA6NLU5 285 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 E7EVH7 732 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 RASGRF2O14827 1237 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 OR1I1O60431 355 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 PHF2O75151 1096 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 CLDN1O95832 211 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 FDXRP22570 491 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 AOAHP28039 575 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 CCNFP41002 786 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 EMP3P54852 163 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 AADACL2Q6P093 401 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 KIRREL2Q6UWL6 708 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 PPP1R21Q6ZMI0 780 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 KCNMB4Q86W47 210 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 DNAJB14Q8TBM8 379 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 FAR1Q8WVX9 515 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 INPP5DQ92835 1189 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 FOPNLQ96NB1 174 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 SELENOSQ9BQE4 189 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 HS3ST3B1Q9Y662 390 aa16.14■□□□□ 0.17
TRAPPC3-207ENST00000497251 OR51F1A6NGY5 319 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 SOCS6O14544 535 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 GDF10P55107 478 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 AP2B1P63010 937 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 OCA2Q04671 838 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 ZNF169Q14929 603 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 SLC9A5Q14940 896 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 RBBP7Q16576 425 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 CCDC38Q502W7 563 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 ISLR2Q6UXK2 745 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 C4orf22Q6V702 233 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 DESI2Q9BSY9 194 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 PLAGL1Q9UM63 463 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 CDC14AQ9UNH5 594 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 NOVA2Q9UNW9 492 aaKnown RBP16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 PCSK5Q92824 1860 aa16.13■□□□□ 0.17
TRAPPC3-207ENST00000497251 A0A1B0GUH1 482 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 PFDN6O15212 129 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms