RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 FGF3P11487 239 aaPredicted RBP11.47□□□□□ -0.57
APTX-227ENST00000485479 TFEBP19484 476 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 CSRP3P50461 194 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 TBPL1P62380 186 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 TAP2Q03519 686 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 SQSTM1Q13501 440 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 SF1Q15637 639 aaKnown RBP11.47□□□□□ -0.57
APTX-227ENST00000485479 PRAMEF17Q5VTA0 474 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 KIAA1614Q5VZ46 1190 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 FBXO39Q8N4B4 442 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 MAGEC3Q8TD91 643 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 MCOLN3Q8TDD5 553 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 CMKLR1Q99788 373 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 EGFL8Q99944 293 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 DERL2Q9GZP9 239 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 POPDC3Q9HBV1 291 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 FAM60AQ9NP50 221 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 ZNF180Q9UJW8 692 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 ACOT9Q9Y305 439 aa11.47□□□□□ -0.57
APTX-227ENST00000485479 TLCD2A6NGC4 264 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 EIF3FO00303 357 aaPredicted RBP11.46□□□□□ -0.58
APTX-227ENST00000485479 PLD2O14939 933 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 BRINP1O60477 761 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 RFPL1O75677 317 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 JMJD7P0C870 316 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 FOLR1P15328 257 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 CSTF2P33240 577 aaKnown RBP eCLIP11.46□□□□□ -0.58
APTX-227ENST00000485479 GDF5P43026 501 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 CYP4F3Q08477 520 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 NAE1Q13564 534 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 GPR19Q15760 415 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 TAF1BQ53T94 588 aaPredicted RBP11.46□□□□□ -0.58
APTX-227ENST00000485479 THEMIS2Q5TEJ8 643 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 ANKS6Q68DC2 871 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 LRRC8EQ6NSJ5 796 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 MZB1Q8WU39 189 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 PRR11Q96HE9 360 aaPredicted RBP11.46□□□□□ -0.58
APTX-227ENST00000485479 STRADBQ9C0K7 418 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 C12orf65Q9H3J6 166 aaKnown RBP11.46□□□□□ -0.58
APTX-227ENST00000485479 EPB41L1Q9H4G0 881 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 PDP2Q9P2J9 529 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 EPHA6Q9UF33 1036 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 LNPEPQ9UIQ6 1025 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 TLK1Q9UKI8 766 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 MSRB2Q9Y3D2 182 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 ASB1Q9Y576 335 aa11.46□□□□□ -0.58
APTX-227ENST00000485479 CCDC187A0A096LP49 1063 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 UBXN8O00124 270 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 KRT37O76014 449 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 TNFSF15O95150 251 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 STATHP02808 62 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 SNRPAP09012 282 aaKnown RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 LTA4HP09960 611 aaKnown RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 HIST1H2AGP0C0S8 130 aaPredicted RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 ERGP11308 486 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 HIST1H2ADP20671 130 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 CRABP2P29373 138 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 SERPINB9P50453 376 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 IFFO1Q0D2I5 559 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 SP140Q13342 867 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 TGFBIQ15582 683 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 CYP2A13Q16696 494 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 AGTRAPQ6RW13 159 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 TAOK1Q7L7X3 1001 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 ISCA2Q86U28 154 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 LRRC56Q8IYG6 542 aaPredicted RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 AGBL5Q8NDL9 886 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 OR2A1Q8NGT9 310 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 LIN37Q96GY3 246 aaPredicted RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 PDLIM5Q96HC4 596 aaKnown RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 HIST1H2AHQ96KK5 128 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 OR6C1Q96RD1 312 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 HIST1H2AJQ99878 128 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 H2AFJQ9BTM1 129 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 ZNF768Q9H5H4 540 aaKnown RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 ACSS2Q9NR19 701 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 CUEDC1Q9NWM3 386 aaPredicted RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 FOXJ2Q9P0K8 574 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 RNF112Q9ULX5 631 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 NEUROG3Q9Y4Z2 214 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 IGF2RP11717 2491 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 TEX51A0A1B0GUA7 166 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 FAM221BA6H8Z2 402 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 TK2O00142 265 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 PRICKLE3O43900 615 aaPredicted RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 TIAF1O95411 115 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 PYGBP11216 843 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 KRT15P19012 456 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 MAGEA12P43365 314 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 FAM219BQ5XKK7 198 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 PRSS42Q7Z5A4 293 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 PLD3Q8IV08 490 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 C4orf33Q8N1A6 199 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 NAF1Q96HR8 494 aaKnown RBP11.45□□□□□ -0.58
APTX-227ENST00000485479 TSNARE1Q96NA8 513 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 GPR78Q96P69 363 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 TRAPPC9Q96Q05 1148 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 CCDC77Q9BR77 488 aa11.45□□□□□ -0.58
APTX-227ENST00000485479 RAB33BQ9H082 229 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms