RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 FAM47EQ6ZV65 393 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 MARK2Q7KZI7 788 aaKnown RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 NFE4Q86UQ8 179 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 GALNT13Q8IUC8 556 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 BEST3Q8N1M1 668 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 FBXO39Q8N4B4 442 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 PCDH20Q8N6Y1 951 aaKnown RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 OR2AK2Q8NG84 335 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 KIF18AQ8NI77 898 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 HMGCLL1Q8TB92 370 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 SETD6Q8TBK2 473 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 UTP15Q8TED0 518 aaKnown RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 TEKT4Q8WW24 435 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 SECISBP2LQ93073 1101 aaKnown RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 ABTB1Q969K4 478 aaPredicted RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 SPACA9Q96E40 222 aaPredicted RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 WBP1Q96G27 269 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 GRAMD2BQ96HH9 432 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 NEK1Q96PY6 1258 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 MTERF1Q99551 399 aaKnown RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 CMKLR1Q99788 373 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 HGH1Q9BTY7 390 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 TRMT61BQ9BVS5 477 aaKnown RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 SEBOXQ9HB31 216 aaPredicted RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 MRGBPQ9NV56 204 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 TRMT1Q9NXH9 659 aaKnown RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 WDR35Q9P2L0 1181 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 RASAL2Q9UJF2 1139 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 GAB2Q9UQC2 676 aa3.54□□□□□ -1.84
GTF3A-207ENST00000482655 WBP11Q9Y2W2 641 aaKnown RBP3.54□□□□□ -1.84
GTF3A-207ENST00000482655 INSRP06213 1382 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 TONSLQ96HA7 1378 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 URADA6NGE7 173 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 LILRA5A6NI73 299 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 ANKRD28O15084 1053 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 DIAPH2O60879 1101 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 GM2AP17900 193 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 PCGF2P35227 344 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 CDKN1AP38936 164 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 CRIP2P52943 208 aaPredicted RBP3.53□□□□□ -1.84
GTF3A-207ENST00000482655 EEF1A1P68104 462 aaKnown RBP3.53□□□□□ -1.84
GTF3A-207ENST00000482655 DEFB115Q30KQ5 88 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 C6orf163Q5TEZ5 329 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 EEF1A1P5Q5VTE0 462 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 TMEM211Q6ICI0 200 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 KCTD8Q6ZWB6 473 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 ADCK2Q7Z695 626 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 TMEM173Q86WV6 379 aaPredicted RBP3.53□□□□□ -1.84
GTF3A-207ENST00000482655 METTL23Q86XA0 190 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 MFN1Q8IWA4 741 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 C1orf87Q8N0U7 546 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 RASGEF1CQ8N431 466 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 RBM15BQ8NDT2 890 aaKnown RBP3.53□□□□□ -1.84
GTF3A-207ENST00000482655 OR10S1Q8NGN2 331 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 CFAP61Q8NHU2 1237 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 GRAPLQ8TC17 118 aaPredicted RBP3.53□□□□□ -1.84
GTF3A-207ENST00000482655 QRFPRQ96P65 431 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 LRRC1Q9BTT6 524 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 SLC25A23Q9BV35 468 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 NUP85Q9BW27 656 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 MOV10L1Q9BXT6 1211 aaKnown RBP3.53□□□□□ -1.84
GTF3A-207ENST00000482655 TMEM30AQ9NV96 361 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 ARGLU1Q9NWB6 273 aaPredicted RBP3.53□□□□□ -1.84
GTF3A-207ENST00000482655 FAM118AQ9NWS6 357 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 HAO2Q9NYQ3 351 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 C5AR2Q9P296 337 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 CRNNQ9UBG3 495 aaPredicted RBP3.53□□□□□ -1.84
GTF3A-207ENST00000482655 SLC24A2Q9UI40 661 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 TUBE1Q9UJT0 475 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 FAF1Q9UNN5 650 aaPredicted RBP3.53□□□□□ -1.84
GTF3A-207ENST00000482655 KLHL20Q9Y2M5 609 aa3.53□□□□□ -1.84
GTF3A-207ENST00000482655 RTL1A6NKG5 1358 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 TRPM7Q96QT4 1865 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 SOS1Q07889 1333 aaPredicted RBP3.52□□□□□ -1.85
GTF3A-207ENST00000482655 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 ARHGEF37A1IGU5 675 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 PLPP2O43688 288 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 EDIL3O43854 480 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 WDR1O75083 606 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 TADA2AO75478 443 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 SERPINB2P05120 415 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 LINGO3P0C6S8 592 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 GLULP15104 373 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 UGT1A1P22309 533 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 EEF1B2P24534 225 aaKnown RBP3.52□□□□□ -1.85
GTF3A-207ENST00000482655 NMBRP28336 390 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 CORO1AP31146 461 aaKnown RBP3.52□□□□□ -1.85
GTF3A-207ENST00000482655 MC5RP33032 325 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 APOBEC1P41238 236 aaKnown RBP3.52□□□□□ -1.85
GTF3A-207ENST00000482655 CRKLP46109 303 aaKnown RBP3.52□□□□□ -1.85
GTF3A-207ENST00000482655 HOXA1P49639 335 aaPredicted RBP3.52□□□□□ -1.85
GTF3A-207ENST00000482655 CTSCP53634 463 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 PPARDQ03181 441 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 BFSP1Q12934 665 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 HSPB3Q12988 150 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 SCARB2Q14108 478 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 C18orf63Q68DL7 685 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 BRAT1Q6PJG6 821 aa3.52□□□□□ -1.85
GTF3A-207ENST00000482655 ERN2Q76MJ5 926 aaKnown RBP3.52□□□□□ -1.85
GTF3A-207ENST00000482655 CEP57Q86XR8 500 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms