RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 ANKMY2Q8IV38 441 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 C2orf73Q8N5S3 287 aaPredicted RBP14.53□□□□□ -0.08
CALD1-215ENST00000472096 BBOF1Q8ND07 529 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 OR1L3Q8NH93 324 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 CD200R1Q8TD46 325 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 MAGEC3Q8TD91 643 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 DENND1AQ8TEH3 1009 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 SLC45A3Q96JT2 553 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 ERP44Q9BS26 406 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 EFHD1Q9BUP0 239 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 SLC12A9Q9BXP2 914 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 CHRNA10Q9GZZ6 450 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 SPATA7Q9P0W8 599 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 WHRNQ9P202 907 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 IL17BQ9UHF5 180 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 CROTQ9UKG9 612 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 SLC39A10Q9ULF5 831 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 DHRS7Q9Y394 339 aa14.53□□□□□ -0.08
CALD1-215ENST00000472096 TERTO14746 1132 aaKnown RBP14.52□□□□□ -0.09
CALD1-215ENST00000472096 VPS26AO75436 327 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 PSIP1O75475 530 aaKnown RBP14.52□□□□□ -0.09
CALD1-215ENST00000472096 NTRK1P04629 796 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 ENO3P13929 434 aaPredicted RBP14.52□□□□□ -0.09
CALD1-215ENST00000472096 GABRB3P28472 473 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 GABRA4P48169 554 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 CALCOCO2Q13137 446 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 DEFB110Q30KQ9 67 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 RBM20Q5T481 1227 aaKnown RBP14.52□□□□□ -0.09
CALD1-215ENST00000472096 TEDDM1Q5T9Z0 273 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 DUPD1Q68J44 220 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 FAM20CQ8IXL6 584 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 RAB42Q8N4Z0 105 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 FBXO36Q8NEA4 188 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 HMGCLL1Q8TB92 370 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 INPP5DQ92835 1189 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 SLC22A18Q96BI1 424 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 TCTN2Q96GX1 697 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 NDNQ99608 321 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 FAM60AQ9NP50 221 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 LHX9Q9NQ69 397 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 GRHL1Q9NZI5 618 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 CCDC88CQ9P219 2028 aa14.52□□□□□ -0.09
CALD1-215ENST00000472096 ATRXP46100 2492 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 ZNF891A8MT65 544 aaPredicted RBP14.51□□□□□ -0.09
CALD1-215ENST00000472096 RNF223E7ERA6 249 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 MYO1CO00159 1063 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 PRICKLE3O43900 615 aaPredicted RBP14.51□□□□□ -0.09
CALD1-215ENST00000472096 CATP04040 527 aaKnown RBP14.51□□□□□ -0.09
CALD1-215ENST00000472096 MPC1LP0DKB6 136 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 CBSLP0DN79 551 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 ERGP11308 486 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 MAGP20916 626 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 F8A1P23610 371 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 CBSP35520 551 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 DLSTP36957 453 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 ITGA1P56199 1179 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 CYP4F2P78329 520 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 TIAL1Q01085 375 aaKnown RBP eCLIP14.51□□□□□ -0.09
CALD1-215ENST00000472096 CKAP4Q07065 602 aaKnown RBP14.51□□□□□ -0.09
CALD1-215ENST00000472096 CBLBQ13191 982 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 GPS2Q13227 327 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 FRG1Q14331 258 aaKnown RBP14.51□□□□□ -0.09
CALD1-215ENST00000472096 TAF1BQ53T94 588 aaPredicted RBP14.51□□□□□ -0.09
CALD1-215ENST00000472096 PRAMEF17Q5VTA0 474 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 CPNE9Q8IYJ1 553 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 STARD8Q92502 1023 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 PPANQ9NQ55 473 aaKnown RBP14.51□□□□□ -0.09
CALD1-215ENST00000472096 FAM114A2Q9NRY5 505 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 TRMT6Q9UJA5 497 aaKnown RBP14.51□□□□□ -0.09
CALD1-215ENST00000472096 CDC23Q9UJX2 597 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 PADI1Q9ULC6 663 aa14.51□□□□□ -0.09
CALD1-215ENST00000472096 MRPS18BQ9Y676 258 aaKnown RBP14.51□□□□□ -0.09
CALD1-215ENST00000472096 EIF3FO00303 357 aaPredicted RBP14.5□□□□□ -0.09
CALD1-215ENST00000472096 HCRTR1O43613 425 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 FKBP9O95302 570 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 AHSGP02765 367 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 ITGB2P05107 769 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 CYP2A7P20853 494 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 MCM3P25205 808 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 PSMB5P28074 263 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 OAS2P29728 719 aaKnown RBP14.5□□□□□ -0.09
CALD1-215ENST00000472096 DNASE1L3Q13609 305 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 CYP2A13Q16696 494 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 PIWIL4Q7Z3Z4 852 aaKnown RBP14.5□□□□□ -0.09
CALD1-215ENST00000472096 ZBED8Q8IZ13 594 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 SLC38A9Q8NBW4 561 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 FBXO15Q8NCQ5 510 aaPredicted RBP14.5□□□□□ -0.09
CALD1-215ENST00000472096 LSM14AQ8ND56 463 aaKnown RBP14.5□□□□□ -0.09
CALD1-215ENST00000472096 OR9A1PQ8NGU1 263 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 CT55Q8WUE5 264 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 WBP1Q96G27 269 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 LRFN5Q96NI6 719 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 RAB17Q9H0T7 212 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 TAS2R13Q9NYV9 303 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 CORO1CQ9ULV4 474 aaPredicted RBP14.5□□□□□ -0.09
CALD1-215ENST00000472096 KLHL20Q9Y2M5 609 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 UTP11Q9Y3A2 253 aaKnown RBP14.5□□□□□ -0.09
CALD1-215ENST00000472096 COL6A6A6NMZ7 2263 aa14.5□□□□□ -0.09
CALD1-215ENST00000472096 A0A1W2PPV9 198 aa14.49□□□□□ -0.09
CALD1-215ENST00000472096 E7EQ34 232 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms