RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 ITGA7Q13683 1181 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 ODF4Q2M2E3 257 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 KIAA1644Q3SXP7 199 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 GTDC1Q4AE62 458 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 MCMDC2Q4G0Z9 681 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 SLC25A53Q5H9E4 307 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 CYP4A22Q5TCH4 519 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 SLC16A9Q7RTY1 509 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 CCDC186Q7Z3E2 898 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 APLFQ8IW19 511 aaPredicted RBP3.68□□□□□ -1.82
PTPN12-210ENST00000464313 FAM219AQ8IW50 185 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 CCAR2Q8N163 923 aaKnown RBP3.68□□□□□ -1.82
PTPN12-210ENST00000464313 VANGL1Q8TAA9 524 aaPredicted RBP3.68□□□□□ -1.82
PTPN12-210ENST00000464313 GRAPLQ8TC17 118 aaPredicted RBP3.68□□□□□ -1.82
PTPN12-210ENST00000464313 PHLDA1Q8WV24 401 aaPredicted RBP3.68□□□□□ -1.82
PTPN12-210ENST00000464313 SIPA1Q96FS4 1042 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 ZMAT2Q96NC0 199 aaKnown RBP3.68□□□□□ -1.82
PTPN12-210ENST00000464313 CCDC3Q9BQI4 270 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 FSD1Q9BTV5 496 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 SLC25A23Q9BV35 468 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 KATNB1Q9BVA0 655 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 TBC1D7Q9P0N9 293 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 ANAPC5Q9UJX4 755 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 C2CD2Q9Y426 696 aa3.68□□□□□ -1.82
PTPN12-210ENST00000464313 A0A0G2JLW4 131 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 ENO4A6NNW6 628 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 ZNF500O60304 480 aaPredicted RBP3.67□□□□□ -1.82
PTPN12-210ENST00000464313 TRMUO75648 421 aaKnown RBP3.67□□□□□ -1.82
PTPN12-210ENST00000464313 RECQL5O94762 991 aaPredicted RBP3.67□□□□□ -1.82
PTPN12-210ENST00000464313 DARSP14868 501 aaKnown RBP3.67□□□□□ -1.82
PTPN12-210ENST00000464313 CDH3P22223 829 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 ANOS1P23352 680 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 ITGA3P26006 1051 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 CHRNB4P30926 498 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 CDKN1AP38936 164 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 LIMK1P53667 647 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 GCNT1Q02742 428 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 PPIGQ13427 754 aaKnown RBP eCLIP3.67□□□□□ -1.827e-10■■■□□ 15.1
PTPN12-210ENST00000464313 ARMC3Q5W041 872 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 ARHGAP17Q68EM7 881 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 IL27RAQ6UWB1 636 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 PIGZQ86VD9 579 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 NUDT13Q86X67 352 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 CNBD1Q8NA66 436 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 TRIM58Q8NG06 486 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 OR4C3Q8NH37 302 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 OR52N5Q8NH56 324 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 EXT2Q93063 718 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 LRRC3BQ96PB8 259 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 F2RL3Q96RI0 385 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 ZNF696Q9H7X3 374 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 Q9H8V8 135 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 CDH20Q9HBT6 801 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 DNAJC4Q9NNZ3 241 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 ZCCHC17Q9NP64 241 aaKnown RBP3.67□□□□□ -1.82
PTPN12-210ENST00000464313 SCRT2Q9NQ03 307 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 FGF21Q9NSA1 209 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 FAM207AQ9NSI2 230 aaPredicted RBP3.67□□□□□ -1.82
PTPN12-210ENST00000464313 INTS9Q9NV88 658 aaKnown RBP3.67□□□□□ -1.82
PTPN12-210ENST00000464313 P4HTMQ9NXG6 502 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 STUB1Q9UNE7 303 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 TCF19Q9Y242 345 aa3.67□□□□□ -1.82
PTPN12-210ENST00000464313 IGHV4-61A0A0C4DH41 118 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 CLPTM1O96005 669 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 GSRP00390 522 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 IGHV4-59P01825 116 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 IGHV4-31P0DP07 118 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 TCEA1P23193 301 aaKnown RBP3.66□□□□□ -1.82
PTPN12-210ENST00000464313 EEF1B2P24534 225 aaKnown RBP3.66□□□□□ -1.82
PTPN12-210ENST00000464313 RPL21P46778 160 aaKnown RBP3.66□□□□□ -1.82
PTPN12-210ENST00000464313 TUBB4BP68371 445 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 ZNF273Q14593 569 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 HERC3Q15034 1050 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 RRS1Q15050 365 aaKnown RBP3.66□□□□□ -1.82
PTPN12-210ENST00000464313 TAF13Q15543 124 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 ZNF876PQ49A33 203 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 LBHQ53QV2 105 aaPredicted RBP3.66□□□□□ -1.82
PTPN12-210ENST00000464313 FFAR4Q5NUL3 377 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 TRAT1Q6PIZ9 186 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 MAML2Q8IZL2 1156 aaPredicted RBP3.66□□□□□ -1.82
PTPN12-210ENST00000464313 ZNF611Q8N823 705 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 IQUBQ8NA54 791 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 OR4K1Q8NGD4 311 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 OR10Q1Q8NGQ4 319 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 OR2T11Q8NH01 316 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 FBXO17Q96EF6 278 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 HES6Q96HZ4 224 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 FAM71F1Q96KD3 344 aaPredicted RBP3.66□□□□□ -1.82
PTPN12-210ENST00000464313 PRAC1Q96KF2 57 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 SPATA33Q96N06 139 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 PRRG4Q9BZD6 226 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 OR2B2Q9GZK3 357 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 MIS12Q9H081 205 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 SHARPINQ9H0F6 387 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 ZNF71Q9NQZ8 489 aaPredicted RBP3.66□□□□□ -1.82
PTPN12-210ENST00000464313 DDX43Q9NXZ2 648 aaKnown RBP3.66□□□□□ -1.82
PTPN12-210ENST00000464313 SPHK1Q9NYA1 384 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 POLLQ9UGP5 575 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 GAB2Q9UQC2 676 aa3.66□□□□□ -1.82
PTPN12-210ENST00000464313 TNNQ9UQP3 1299 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms