RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 IRGCQ6NXR0 463 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 SBSNQ6UWP8 590 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 RBM44Q6ZP01 1051 aaKnown RBP11.22□□□□□ -0.61
LINC00408-201ENST00000447784 TCAIMQ8N3R3 496 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 CCDC63Q8NA47 563 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 OR2L8Q8NGY9 312 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 RHEBL1Q8TAI7 183 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 SMPDL3AQ92484 453 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 MED8Q96G25 268 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 IL17FQ96PD4 163 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 MRPL46Q9H2W6 279 aaKnown RBP11.22□□□□□ -0.61
LINC00408-201ENST00000447784 CNOT10Q9H9A5 744 aaKnown RBP11.22□□□□□ -0.61
LINC00408-201ENST00000447784 RDH14Q9HBH5 336 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 IKZF3Q9UKT9 509 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 TMCO1Q9UM00 188 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 ICKQ9UPZ9 632 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 ENTPD2Q9Y5L3 495 aa11.22□□□□□ -0.61
LINC00408-201ENST00000447784 CACNA1BQ00975 2339 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 CEP295Q9C0D2 2601 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 CAPN5O15484 640 aaPredicted RBP11.21□□□□□ -0.61
LINC00408-201ENST00000447784 SMIM24O75264 130 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 DXOO77932 396 aaKnown RBP11.21□□□□□ -0.61
LINC00408-201ENST00000447784 SLC16A8O95907 504 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 CHRM5P08912 532 aaPredicted RBP11.21□□□□□ -0.61
LINC00408-201ENST00000447784 GFAPP14136 432 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 POLR2CP19387 275 aaPredicted RBP11.21□□□□□ -0.61
LINC00408-201ENST00000447784 CCND1P24385 295 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 CRHR1P34998 444 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 CAPZBP47756 277 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 GRB7Q14451 532 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 KIR2DS3Q14952 304 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 TGFBIQ15582 683 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 CYP2A13Q16696 494 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 PPP1R3AQ16821 1122 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 SULT1C3Q6IMI6 304 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 CAPN13Q6MZZ7 669 aaPredicted RBP11.21□□□□□ -0.61
LINC00408-201ENST00000447784 WDR74Q6RFH5 385 aaPredicted RBP11.21□□□□□ -0.61
LINC00408-201ENST00000447784 AGTRAPQ6RW13 159 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 CLEC14AQ86T13 490 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 RASGRP3Q8IV61 690 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 LSMEM2Q8N112 164 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 PLD6Q8N2A8 252 aaKnown RBP11.21□□□□□ -0.61
LINC00408-201ENST00000447784 C2orf73Q8N5S3 287 aaPredicted RBP11.21□□□□□ -0.61
LINC00408-201ENST00000447784 ZNF480Q8WV37 535 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 DLG3Q92796 817 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 PTERQ96BW5 349 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 FBXL8Q96CD0 374 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 APOPT1Q96IL0 206 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 GPR78Q96P69 363 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 TGM7Q96PF1 710 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 PCBD2Q9H0N5 130 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 TMBIM4Q9HC24 238 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 ABCF3Q9NUQ8 709 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 ACTR10Q9NZ32 417 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 WWOXQ9NZC7 414 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 NUDT4Q9NZJ9 180 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.61
LINC00408-201ENST00000447784 CPSF2Q9P2I0 782 aaKnown RBP11.21□□□□□ -0.61
LINC00408-201ENST00000447784 XPR1Q9UBH6 696 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 AK5Q9Y6K8 562 aa11.21□□□□□ -0.61
LINC00408-201ENST00000447784 TPRP12270 2363 aaKnown RBP11.21□□□□□ -0.62
LINC00408-201ENST00000447784 ARID1BQ8NFD5 2236 aaPredicted RBP11.21□□□□□ -0.62
LINC00408-201ENST00000447784 SCN8AQ9UQD0 1980 aa11.21□□□□□ -0.62
LINC00408-201ENST00000447784 CHD8Q9HCK8 2581 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 KRT87PA6NCN2 255 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 TMX2-CTNND1H3BSU7 103 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 BTN3A3O00478 584 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 DYNC1I1O14576 645 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 RASSF9O75901 435 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 LSSP48449 732 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 ARL4DP49703 201 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 SLC18A2Q05940 514 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 SQSTM1Q13501 440 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 NAE1Q13564 534 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 SF1Q15637 639 aaKnown RBP11.2□□□□□ -0.62
LINC00408-201ENST00000447784 CCDC153Q494R4 210 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 TECRLQ5HYJ1 363 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 C16orf46Q6P387 395 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 TMEM71Q6P5X7 295 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 IGF2-ASQ6U949 168 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 TAX1BP1Q86VP1 789 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 FBXO39Q8N4B4 442 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 BANPQ8N9N5 519 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 HMGCLL1Q8TB92 370 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 RSC1A1Q92681 617 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 CD180Q99467 661 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 RAB33BQ9H082 229 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 ATG10Q9H0Y0 220 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 POLR1BQ9H9Y6 1135 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 KCNK9Q9NPC2 374 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 CCDC177Q9NQR7 707 aaPredicted RBP11.2□□□□□ -0.62
LINC00408-201ENST00000447784 ZNF358Q9NW07 568 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 AKAP7Q9P0M2 348 aaPredicted RBP11.2□□□□□ -0.62
LINC00408-201ENST00000447784 TMEM216Q9P0N5 145 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 EPHA6Q9UF33 1036 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 KLHL3Q9UH77 587 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 METRNQ9UJH8 293 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 MID2Q9UJV3 735 aa11.2□□□□□ -0.62
LINC00408-201ENST00000447784 ATXN7L1Q9ULK2 861 aaPredicted RBP11.2□□□□□ -0.62
LINC00408-201ENST00000447784 PCDHB11Q9Y5F2 797 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms