RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 AURKBQ96GD4 344 aaPredicted RBP10.41□□□□□ -0.74
CUX1-205ENST00000425244 MUS81Q96NY9 551 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 OR52E6Q96RD3 313 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 NPLQ9BXD5 320 aaPredicted RBP10.41□□□□□ -0.74
CUX1-205ENST00000425244 CXorf21Q9HAI6 301 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 NTN4Q9HB63 628 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 PRM3Q9NNZ6 103 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 TIMMDC1Q9NPL8 285 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 C8orf4Q9NR00 106 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 FAM8A1Q9UBU6 413 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 ADGRE2Q9UHX3 823 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 UTS2RQ9UKP6 389 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 PIKFYVEQ9Y2I7 2098 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.4□□□□□ -0.74
CUX1-205ENST00000425244 KRT87PA6NCN2 255 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 OTOL1A6NHN0 477 aaPredicted RBP10.4□□□□□ -0.74
CUX1-205ENST00000425244 SLC28A1O00337 649 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 GFRA2O00451 464 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 TULP3O75386 442 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 STK16O75716 305 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 IGSF6O95976 241 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 PGRP06401 933 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 C7P10643 843 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 NEK2P51955 445 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 CTBSQ01459 385 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 HSPA14Q0VDF9 509 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 GRIN2CQ14957 1233 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 TTLL9Q3SXZ7 439 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 DGKKQ5KSL6 1271 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 TANGO2Q6ICL3 276 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 SUSD1Q6UWL2 747 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 KCTD8Q6ZWB6 473 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 GPR149Q86SP6 731 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 HS3ST5Q8IZT8 346 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 GPR26Q8NDV2 337 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 OR8J3Q8NGG0 315 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 FIBINQ8TAL6 211 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 CYB5D2Q8WUJ1 264 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 C12orf43Q96C57 262 aaKnown RBP10.4□□□□□ -0.74
CUX1-205ENST00000425244 DHRS1Q96LJ7 313 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 ASB16Q96NS5 453 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 TUBA8Q9NY65 449 aaPredicted RBP10.4□□□□□ -0.74
CUX1-205ENST00000425244 TBC1D14Q9P2M4 693 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 INVSQ9Y283 1065 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 NEUROG3Q9Y4Z2 214 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 PCDHGA11Q9Y5H2 935 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 HEPACAM2A8MVW5 462 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 NOBOXO60393 691 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 PFKLP17858 780 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 SERPINA4P29622 427 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 TPD52P55327 224 aaPredicted RBP10.4□□□□□ -0.74
CUX1-205ENST00000425244 KIAA0040Q15053 153 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 DHCR24Q15392 516 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 NKG7Q16617 165 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 LRRC66Q68CR7 880 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 GRAMD4Q6IC98 578 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 CES5AQ6NT32 575 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 ANKRD54Q6NXT1 300 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 ZDHHC13Q8IUH4 622 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 ZNF366Q8N895 744 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 OR10Q1Q8NGQ4 319 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 GAB3Q8WWW8 586 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 SMARCD2Q92925 531 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 PYCR2Q96C36 320 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 KXD1Q9BQD3 176 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 ADNPQ9H2P0 1102 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 SMURF2Q9HAU4 748 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 PARVBQ9HBI1 364 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 LTB4R2Q9NPC1 389 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 ZDHHC4Q9NPG8 344 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 TMEM45AQ9NWC5 275 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 SLC25A37Q9NYZ2 338 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 IFT80Q9P2H3 777 aaPredicted RBP10.4□□□□□ -0.74
CUX1-205ENST00000425244 SLCO3A1Q9UIG8 710 aa10.4□□□□□ -0.74
CUX1-205ENST00000425244 GRXCR2A6NFK2 248 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 IFRD1O00458 451 aaPredicted RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 FOXD2O60548 495 aaPredicted RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 LRATO95237 230 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 B3GALT4O96024 378 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 CST1P01037 141 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 THRBP10828 461 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 MSH3P20585 1137 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 STT3AP46977 705 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 RPIAP49247 311 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 GALK1P51570 392 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 MESP2Q0VG99 397 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 MAD2L1Q13257 205 aaPredicted RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 DCTN2Q13561 401 aaKnown RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 DAG1Q14118 895 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 RAB39AQ14964 217 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 FXNQ16595 210 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ATAT1Q5SQI0 421 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 CRTC1Q6UUV9 634 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 MACC1Q6ZN28 852 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 PRR23BQ6ZRT6 265 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 TMEM26Q6ZUK4 368 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 GFM2Q969S9 779 aaKnown RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 SLC47A1Q96FL8 570 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 TSSK3Q96PN8 268 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 CDCA3Q99618 268 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms