RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TRIM10Q9UDY6 481 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 STK39Q9UEW8 545 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 SLC12A6Q9UHW9 1150 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 FBXW11Q9UKB1 542 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 AMDHD2Q9Y303 409 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 UTP11Q9Y3A2 253 aaKnown RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 DOCK7Q96N67 2140 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 NHSL1Q5SYE7 1610 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 CICQ96RK0 1608 aaPredicted RBP2.6□□□□□ -1.99
VPS41-206ENST00000418457 SCN7AQ01118 1682 aa2.6□□□□□ -1.99
VPS41-206ENST00000418457 COL1A1P02452 1464 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 CACNA1SQ13698 1873 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 A0A0G2JPF8 293 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 DENND3A2RUS2 1198 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 MAGEA13PA6NCF6 341 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 A6NCN8 305 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 TRIM49BA6NDI0 452 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 CCT8L1PA6NM43 557 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 EIF4E1BA6NMX2 242 aaKnown RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 HNRNPCL2B2RXH8 293 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ERVV-1B6SEH8 477 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 HNRNPCL3B7ZW38 293 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ZNF263O14978 683 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 VILLO15195 856 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 PPIP5K2O43314 1243 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 RTN2O75298 545 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 GPC4O75487 556 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 PALMO75781 387 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ATP5HO75947 161 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 NEBLO76041 1014 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 MOCS3O95396 460 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ATP6V1G2O95670 118 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 PPP1R3DO95685 299 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 STARD3NLO95772 234 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 AGTP01019 485 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 KRT14P02533 472 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 HIST1H2ABP04908 130 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 RB1P06400 928 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 SRPRAP08240 638 aaKnown RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 NUDT17P0C025 328 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 HNRNPCL4P0DMR1 293 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ACTN1P12814 892 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ALOX12P18054 663 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 GABRB1P18505 474 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ANXA7P20073 488 aaKnown RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 HIST1H2ADP20671 130 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 S1PR1P21453 382 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 CASP1P29466 404 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 GNA11P29992 359 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 CCKBRP32239 447 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 HPDP32754 393 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 GNL1P36915 607 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 HSD17B3P37058 310 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 PSMB10P40306 273 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 GARSP41250 739 aaKnown RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 MATR3P43243 847 aaKnown RBP eCLIP2.59□□□□□ -1.99
VPS41-206ENST00000418457 SSR1P43307 286 aaKnown RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 CAMPP49913 170 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 CCNG1P51959 295 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 SH3BGRP55822 239 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 RWDD2BP57060 319 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 TAS2R38P59533 333 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ASIC1P78348 528 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ELF3P78545 371 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 PDE1BQ01064 536 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 MC1RQ01726 317 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 CDC16Q13042 620 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 COASYQ13057 564 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 IKQ13123 557 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 AIMP2Q13155 320 aaKnown RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 PDIA5Q14554 519 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 NONOQ15233 471 aaKnown RBP eCLIP2.59□□□□□ -1.99
VPS41-206ENST00000418457 RPS6KA1Q15418 735 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 DECR1Q16698 335 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 TMEM266Q2M3C6 531 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 CCDC152Q4G0S7 254 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 SBK1Q52WX2 424 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ERMARDQ5T6L9 678 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 WDR78Q5VTH9 848 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 AP1ARQ63HQ0 302 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 PMS2CLQ68D20 193 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 KCTD16Q68DU8 428 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 KIAA0930Q6ICG6 404 aaPredicted RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 CAPRIN2Q6IMN6 1127 aaKnown RBP2.59□□□□□ -1.99
VPS41-206ENST00000418457 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.59□□□□□ -1.99
VPS41-206ENST00000418457 HIST3H2AQ7L7L0 130 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 PIGWQ7Z7B1 504 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 GPR180Q86V85 440 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 VPS36Q86VN1 386 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 SFR1Q86XK3 245 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 CEP57Q86XR8 500 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 NRROSQ86YC3 692 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 ZNF34Q8IZ26 560 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 RASGEF1CQ8N431 466 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 C4orf32Q8N8J7 132 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 CCDC63Q8NA47 563 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 SMRP1Q8NCR6 262 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 OR1J2Q8NGS2 313 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 SPATA22Q8NHS9 363 aa2.59□□□□□ -1.99
VPS41-206ENST00000418457 LMO3Q8TAP4 145 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms