RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CTAGE8P0CG41 777 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 THRBP10828 461 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 CHRNB2P17787 502 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 HRH2P25021 359 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 MPZP25189 248 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 HSPA1LP34931 641 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 MMP13P45452 471 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 PPP3CCP48454 512 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 KRT6CP48668 564 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 ALDH7A1P49419 539 aaKnown RBP4.33□□□□□ -1.72
BRCA1-204ENST00000412061 METAP1P53582 386 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 MFAP3P55082 362 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 MTCP1P56278 107 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 DLK1P80370 383 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 UBE2V1Q13404 147 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 TSTA3Q13630 321 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-204ENST00000412061 NR1D2Q14995 579 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 IMMTQ16891 758 aaKnown RBP4.33□□□□□ -1.72
BRCA1-204ENST00000412061 LRRC23Q53EV4 343 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-204ENST00000412061 EPHA10Q5JZY3 1008 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 MORN5Q5VZ52 161 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 ZDHHC20Q5W0Z9 365 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 SYCE2Q6PIF2 218 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 ZYG11AQ6WRX3 759 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 CTAGE6Q86UF2 777 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 ZNF573Q86YE8 665 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 CTAGE4Q8IX94 777 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 CDH26Q8IXH8 852 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 KLHDC8AQ8IYD2 350 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 FAM133AQ8N9E0 248 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 OR2T34Q8NGX1 318 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 C16orf52Q8NHV5 167 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 ELP5Q8TE02 316 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 SLC35F5Q8WV83 523 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 APBB2Q92870 758 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 TMEM18Q96B42 140 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 TTC25Q96NG3 672 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 NECTIN4Q96NY8 510 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 SSX3Q99909 188 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 WDR77Q9BQA1 342 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-204ENST00000412061 FAM213AQ9BRX8 229 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 C16orf70Q9BSU1 422 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 RAB33BQ9H082 229 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 NAPBQ9H115 298 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 NCOR1P1Q9H4R4 102 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 ESRP2Q9H6T0 727 aaKnown RBP4.33□□□□□ -1.72
BRCA1-204ENST00000412061 RAB9BQ9NP90 201 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 KCNMB3Q9NPA1 279 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 FZD3Q9NPG1 666 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 ZCCHC3Q9NUD5 404 aaKnown RBP4.33□□□□□ -1.72
BRCA1-204ENST00000412061 TRNAU1APQ9NX07 287 aaKnown RBP4.33□□□□□ -1.72
BRCA1-204ENST00000412061 TUBA8Q9NY65 449 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-204ENST00000412061 NDUFA13Q9P0J0 144 aa4.33□□□□□ -1.72
BRCA1-204ENST00000412061 A0A0G2JPF8 293 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 TMEM221A6NGB7 291 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 HNRNPCL3B7ZW38 293 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 H0YIG0 161 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 PES1O00541 588 aaKnown RBP4.32□□□□□ -1.72
BRCA1-204ENST00000412061 TO15178 435 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 MAGEB2O15479 319 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 FLRT2O43155 660 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 PRAF2O60831 178 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 EPN2O95208 641 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 EGFP01133 1207 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 HNRNPCL4P0DMR1 293 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 GZMAP12544 262 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 HNRNPA2B1P22626 353 aaKnown RBP4.32□□□□□ -1.72
BRCA1-204ENST00000412061 CYP2F1P24903 491 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 CHATP28329 748 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 PKLRP30613 574 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 AKT2P31751 481 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 DCTDP32321 178 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 EIF2S3P41091 472 aaKnown RBP4.32□□□□□ -1.72
BRCA1-204ENST00000412061 MTIF2P46199 727 aaKnown RBP4.32□□□□□ -1.72
BRCA1-204ENST00000412061 ME1P48163 572 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 LHX1P48742 406 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 CNN1P51911 297 aaKnown RBP4.32□□□□□ -1.72
BRCA1-204ENST00000412061 MAPK12P53778 367 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 FAM27E3Q08E93 113 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 IL24Q13007 206 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 PDZK1IP1Q13113 114 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 NEDD9Q14511 834 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 MVPQ14764 893 aaKnown RBP4.32□□□□□ -1.72
BRCA1-204ENST00000412061 CCDC142Q17RM4 750 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 EIF2S3LQ2VIR3 472 aaKnown RBP4.32□□□□□ -1.72
BRCA1-204ENST00000412061 MCMDC2Q4G0Z9 681 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 DCAF6Q58WW2 860 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 MTX3Q5HYI7 312 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 Q5PR19 223 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 LDLRAP1Q5SW96 308 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 CYP4A22Q5TCH4 519 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 SULT1C3Q6IMI6 304 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 PRR27Q6MZM9 219 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 MFSD12Q6NUT3 480 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 SHC4Q6S5L8 630 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 CES3Q6UWW8 571 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 NUDT13Q86X67 352 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 DNAJC10Q8IXB1 793 aa4.32□□□□□ -1.72
BRCA1-204ENST00000412061 ZCCHC7Q8N3Z6 543 aaKnown RBP4.32□□□□□ -1.72
BRCA1-204ENST00000412061 TEX45Q8NA69 505 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms