RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CARNS1A5YM72 827 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 TMEM110-MUSTN1A8MSY1 372 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 E9PAM4 449 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 LY6LH3BQJ8 138 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 SYNGR3O43761 229 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 AKR1B10O60218 316 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CIDEAO60543 219 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 SLC24A1O60721 1099 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 NEBLO76041 1014 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 OR6A2O95222 327 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 IGHEP01854 428 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 LDHBP07195 334 aaKnown RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CD55P08174 381 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 MMP2P08253 660 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 HMBSP08397 361 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 POLR2MP0CAP2 368 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CHRNB2P17787 502 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 NAT1P18440 290 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CHRM3P20309 590 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 LHCGRP22888 699 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 RPA1P27694 616 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ADORA2AP29274 412 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 GKP32189 559 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 HOXD13P35453 343 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CAPGP40121 348 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 DCTP40126 519 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ETV5P41161 510 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 MAGEA8P43361 318 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 TFPI2P48307 235 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 GCLCP48506 637 aaPredicted RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ETV1P50549 477 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CLCN4P51793 760 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CSNK2BP67870 215 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ACTA1P68133 377 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 SATB1Q01826 763 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 GUCY1A3Q02108 690 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ARID5AQ03989 594 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 PPFIA1Q13136 1202 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CALCOCO2Q13137 446 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 TRIM29Q14134 588 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 GK3PQ14409 553 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 RAB39AQ14964 217 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 PPP2R5EQ16537 467 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 LY6KQ17RY6 165 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF791Q3KP31 576 aaPredicted RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 TMEM177Q53S58 311 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 WDR38Q5JTN6 314 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CYP4A22Q5TCH4 519 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 LMBRD2Q68DH5 695 aaPredicted RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 PGBD2Q6P3X8 592 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 C17orf99Q6UX52 265 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 UNC5DQ6UXZ4 953 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ERMP1Q7Z2K6 904 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 TMEM110Q86TL2 294 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CAND1Q86VP6 1230 aaKnown RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 THOC6Q86W42 341 aaKnown RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 PSTKQ8IV42 348 aaKnown RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 SELENOHQ8IZQ5 122 aaKnown RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 RNF10Q8N5U6 811 aaKnown RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 KLHDC1Q8N7A1 406 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 FBXL13Q8NEE6 735 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF680Q8NEM1 530 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 OR10G2Q8NGC3 310 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 OR10G8Q8NGN5 311 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 C7orf33Q8WU49 177 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CHPT1Q8WUD6 406 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 TFGQ92734 400 aaPredicted RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 CELF1Q92879 486 aaKnown RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 EXOC4Q96A65 974 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 STAMBPL1Q96FJ0 436 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 SLC39A13Q96H72 371 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 TXNDC15Q96J42 360 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 HARBI1Q96MB7 349 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 C20orf166-AS1Q96NR2 134 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ANKRD27Q96NW4 1050 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 NUP58Q9BVL2 599 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 STRA6Q9BX79 667 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 REG4Q9BYZ8 158 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 POLR1EQ9GZS1 481 aaKnown RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ADNPQ9H2P0 1102 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 TUBB1Q9H4B7 451 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZHX3Q9H4I2 956 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 PCIF1Q9H4Z3 704 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 AKIRIN1Q9H9L7 192 aaPredicted RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 SPATS2LQ9NUQ6 558 aaKnown RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 GPATCH2LQ9NWQ4 482 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 MCM9Q9NXL9 1143 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 KCND3Q9UK17 655 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 GRID1Q9ULK0 1009 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 EDARQ9UNE0 448 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 KLHL20Q9Y2M5 609 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 PRG3Q9Y2Y8 225 aaPredicted RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 FBXO7Q9Y3I1 522 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 YTHDF2Q9Y5A9 579 aaKnown RBP-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 ADAMTS7Q9UKP4 1686 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 MIA3Q5JRA6 1907 aa-1.72□□□□□ -2.69
RNU4-88P-201ENST00000411220 DENND4CQ5VZ89 1909 aa-1.72□□□□□ -2.69
RNU4-88P-201ENST00000411220 ADGRB3O60242 1522 aa-1.72□□□□□ -2.69
RNU4-88P-201ENST00000411220 USP19O94966 1318 aa-1.72□□□□□ -2.69
RNU4-88P-201ENST00000411220 KNDC1Q76NI1 1749 aa-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms