RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SLC22A5O76082 557 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 SCELO95171 688 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 AHSGP02765 367 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 HMGN1P05114 100 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 RETP07949 1114 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 RPS17P08708 135 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 YWHAQP27348 245 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 ATICP31939 592 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CTNNB1P35222 781 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 HMGCLP35914 325 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 ZFP36L2P47974 494 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 SLC6A3Q01959 620 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 PCDH1Q08174 1060 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 SNTA1Q13424 505 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CAPRIN1Q14444 709 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 KYAT1Q16773 422 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 ARMC4Q5T2S8 1044 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 GARNL3Q5VVW2 1013 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 KANK2Q63ZY3 851 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 SHQ1Q6PI26 577 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 FAM183BPQ6ZVS7 135 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 ADGRG3Q86Y34 549 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 LINC00518Q8N0U6 118 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CARNMT1Q8N4J0 409 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 KCT2Q8NC54 265 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 OR52K1Q8NGK4 314 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 HEXDCQ8WVB3 486 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 KHSRPQ92945 711 aaKnown RBP eCLIP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CLP1Q92989 425 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 TSPAN17Q96FV3 270 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CRELD1Q96HD1 420 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 FRMD6Q96NE9 622 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 OPALINQ96PE5 141 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 LPIN3Q9BQK8 851 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 POLR3FQ9H1D9 316 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 MINDY3Q9H8M7 445 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 SMURF2Q9HAU4 748 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 AIG1Q9NVV5 245 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 NDRG4Q9ULP0 352 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 FAM95CA0A1B0GW59 222 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CCDC182A6NF36 153 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 H3BNC9 293 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 M0R082 166 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 TFECO14948 347 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CD3EAPO15446 510 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 PI15O43692 258 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 XPNPEP2O43895 674 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 HUS1O60921 280 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 VPS26AO75436 327 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 PGLSO95336 258 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 PAPSS2O95340 614 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CST1P01037 141 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 LTA4HP09960 611 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 DBTP11182 482 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 ATF6P18850 670 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 FMO4P31512 558 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 GLRBP48167 497 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 RBP5P82980 135 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 IL5RAQ01344 420 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 RAPSNQ13702 412 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 EMC2Q15006 297 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 MAD2L1BPQ15013 274 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 RABL3Q5HYI8 236 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 ZNF678Q5SXM1 525 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 CES3Q6UWW8 571 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 GDPGP1Q6ZNW5 385 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 GPAT4Q86UL3 456 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 KRT73Q86Y46 540 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 TTLQ8NG68 377 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 OR8K5Q8NH50 307 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 SLC39A7Q92504 469 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 REPS1Q96D71 796 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 GPR137Q96N19 417 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 DCLRE1CQ96SD1 692 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 NUSAP1Q9BXS6 441 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 OR51B5Q9H339 312 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 RNF121Q9H920 327 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 TNFRSF12AQ9NP84 129 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 RNF19AQ9NV58 838 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 ING3Q9NXR8 418 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 TEKT2Q9UIF3 430 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 PHF11Q9UIL8 331 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 SNX6Q9UNH7 406 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 FKBP7Q9Y680 259 aa10.38□□□□□ -0.75
NIF3L1-204ENST00000409357 ASPDHA6ND91 283 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 OR6C70A6NIJ9 312 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 MEIS3P2A8K0S8 358 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 AP3D1O14617 1153 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ANKRD28O15084 1053 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 GRM6O15303 877 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 DPM1O60762 260 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ATG13O75143 517 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 CYP7B1O75881 506 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 WISP3O95389 354 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 STAU1O95793 577 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 TNNC2P02585 160 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ADORA3P0DMS8 318 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ICAM2P13598 275 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 NCK1P16333 377 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 MSH3P20585 1137 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms