RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CHRNA1P02708 482 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 SLC15A1P46059 708 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 MANFP55145 182 aaKnown RBP13.58□□□□□ -0.24
COL6A1-201ENST00000361866 CD83Q01151 205 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 RAPSNQ13702 412 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 LGI4Q8N135 537 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 HSH2DQ96JZ2 352 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 DPH2Q9BQC3 489 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-201ENST00000361866 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 MYO7AQ13402 2215 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 ADAMDEC1O15204 470 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 CLDN7O95471 211 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 SPAM1P38567 509 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 ZNF33AQ06730 810 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 NDUFA5Q16718 116 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 VTCN1Q7Z7D3 282 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 FAM110BQ8TC76 370 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 DUSP26Q9BV47 211 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 TIGARQ9NQ88 270 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 VAPAQ9P0L0 249 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 RHCGQ9UBD6 479 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 COMMD3Q9UBI1 195 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 RNF6Q9Y252 685 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 MICAL3Q7RTP6 2002 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 WBP4O75554 376 aaKnown RBP13.58□□□□□ -0.24
COL6A1-201ENST00000361866 ASGR1P07306 291 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 CDH4P55283 916 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 ITGA1P56199 1179 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 INHBEP58166 350 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 ERVPABLB-1P60509 514 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 FAM110CQ1W6H9 321 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 SLC36A3Q495N2 470 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 MZT2BQ6NZ67 158 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 TNFAIP8L2Q6P589 184 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-201ENST00000361866 HACD2Q6Y1H2 254 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 HJURPQ8NCD3 748 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-201ENST00000361866 ZFP90Q8TF47 636 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 Q96MT0 163 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 PKP4Q99569 1192 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 ITPAQ9BY32 194 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 FZD4Q9ULV1 537 aa13.58□□□□□ -0.24
COL6A1-201ENST00000361866 TOGARAM1Q9Y4F4 1720 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 M0QX08 132 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 HAS3O00219 553 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 CHRNA6Q15825 494 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 ERAP2Q6P179 960 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 LRRTM3Q86VH5 581 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 CSGALNACT1Q8TDX6 532 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 FADS2P1A8MWK0 482 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 PLK4O00444 970 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 SLC28A2O43868 658 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 LCKP06239 509 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 POLR2LP62875 67 aaKnown RBP13.57□□□□□ -0.24
COL6A1-201ENST00000361866 SERINC3Q13530 473 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 IL18Q14116 193 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 TSTQ16762 297 aaKnown RBP13.57□□□□□ -0.24
COL6A1-201ENST00000361866 PTCHD3Q3KNS1 767 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 NHSL2Q5HYW2 709 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 USP30Q70CQ3 517 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 USP43Q70EL4 1123 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 CYP4Z2PQ8N1L4 340 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 SOCS4Q8WXH5 440 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 FUBP1Q96AE4 644 aaKnown RBP13.57□□□□□ -0.24
COL6A1-201ENST00000361866 RNF38Q9H0F5 515 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 TVP23BQ9NYZ1 205 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 SPATA7Q9P0W8 599 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 PCDHGB3Q9Y5G1 929 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 DDX60Q8IY21 1712 aaKnown RBP13.57□□□□□ -0.24
COL6A1-201ENST00000361866 CCRL2O00421 344 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 SGTAO43765 313 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 EEDO75530 441 aaKnown RBP13.57□□□□□ -0.24
COL6A1-201ENST00000361866 GADD45GO95257 159 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 SOX14O95416 240 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 F2P00734 622 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 CCL23P55773 120 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 SCN1BQ07699 218 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 PON2Q15165 354 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 SNAPC1Q16533 368 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 HMBOX1Q6NT76 420 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 FUNDC1Q8IVP5 155 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 SPARTQ8N0X7 666 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 RHEBL1Q8TAI7 183 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 NDNFQ8TB73 568 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 NUDT8Q8WV74 236 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 TP53INP1Q96A56 240 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 FNDC11Q9BVV2 318 aa13.57□□□□□ -0.24
COL6A1-201ENST00000361866 CLEC4MQ9H2X3 399 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-201ENST00000361866 MRM3Q9HC36 420 aaKnown RBP13.57□□□□□ -0.24
COL6A1-201ENST00000361866 IFNW1P05000 195 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ITGB1P05556 798 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 FPR1P21462 350 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 TYSND1Q2T9J0 566 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ANXA8L1Q5VT79 327 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 LETMD1Q6P1Q0 360 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ASZ1Q8WWH4 475 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ATL1Q8WXF7 558 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 BARD1Q99728 777 aaKnown RBP13.56□□□□□ -0.24
COL6A1-201ENST00000361866 TUBA1CQ9BQE3 449 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 MAF1Q9H063 256 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 KLHL28Q9NXS3 571 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms