RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 SLC16A8O95907 504 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 PABPC4LP0CB38 370 aaKnown RBP19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 CD72P21854 359 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 MAPK9P45984 424 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 CPSF6Q16630 551 aaKnown RBP eCLIP19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 KIAA1161Q6NSJ0 714 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TMEM92Q6UXU6 159 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 FNDC5Q8NAU1 212 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 SLC45A3Q96JT2 553 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 LRGUKQ96M69 825 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 SLC25A23Q9BV35 468 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 PHF7Q9BWX1 381 aaPredicted RBP19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 RAB26Q9ULW5 256 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TBC1D3DA0A087WVF3 549 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TBC1D3IA0A087WXS9 549 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TBC1D3EA0A087X179 549 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TBC1D3KA0A087X1G2 549 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TBC1D3FA6NER0 549 aaPredicted RBP19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TBC1D3LB9A6J9 549 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 MANBAO00462 879 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TXNDC9O14530 226 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 DNAJA2O60884 412 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TBC1D3HP0C7X1 549 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 PLOD1Q02809 727 aaPredicted RBP19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 NAE1Q13564 534 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 SGO1Q5FBB7 561 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TBC1D3GQ6DHY5 549 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TBC1D3CQ6IPX1 549 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TBC1D3Q8IZP1 549 aaPredicted RBP19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 LILRA2Q8N149 483 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 CATSPER1Q8NEC5 780 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 ADCY4Q8NFM4 1077 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 ATL1Q8WXF7 558 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 DPEP2Q9H4A9 486 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 WDR26Q9H7D7 661 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 TM7SF3Q9NS93 570 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 ZNF490Q9ULM2 529 aaPredicted RBP19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 C15orf38-AP3S2A0A0A6YYH1 394 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 C9JVG2 144 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 ACADLP28330 430 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 TEAD1P28347 426 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 IMPA1P29218 277 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 GSTT1P30711 240 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 MAT2AP31153 395 aaKnown RBP19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 LRP8Q14114 963 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 NR6A1Q15406 480 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 REP15Q6BDI9 236 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 ARPINQ7Z6K5 226 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 FAM124AQ86V42 546 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 LRRTM4Q86VH4 590 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 AMZ2Q86W34 360 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 RNF148Q8N7C7 305 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 FBXO15Q8NCQ5 510 aaPredicted RBP19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 USP7Q93009 1102 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 MTFMTQ96DP5 389 aaKnown RBP19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 MRGPRX1Q96LB2 322 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 SLC29A3Q9BZD2 475 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 TRIM4Q9C037 500 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 SCML1Q9UN30 329 aa19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 COLQQ9Y215 455 aaPredicted RBP19.69■□□□□ 0.74
RIPPLY3-201ENST00000329553 KCNE1BA0A087WTH5 132 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 SOX1O00570 391 aaPredicted RBP19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 NRP2O60462 931 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 SKIV2LQ15477 1246 aaKnown RBP19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 AP5B1Q2VPB7 878 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 RNF165Q6ZSG1 346 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 TRIM46Q7Z4K8 759 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 THOC6Q86W42 341 aaKnown RBP19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 HORMAD1Q86X24 394 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 L3MBTL4Q8NA19 623 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 FAM3CQ92520 227 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 TEX37Q96LM6 180 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 OR52A5Q9H2C5 316 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 COPS7BQ9H9Q2 264 aaPredicted RBP19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 CD93Q9NPY3 652 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 PCDHGA7Q9Y5G6 932 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 TRIM38O00635 465 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 MRPL19P49406 292 aaKnown RBP19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 HMGCS1Q01581 520 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 EMX2Q04743 252 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 C11orf91Q3C1V1 193 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 GGTA1PQ4G0N0 100 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 RFTN2Q52LD8 501 aaPredicted RBP19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 MED8Q96G25 268 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 ZDHHC5Q9C0B5 715 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 BRINP2Q9C0B6 783 aa19.68■□□□□ 0.74
RIPPLY3-201ENST00000329553 SLC28A1O00337 649 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 FUCA1P04066 466 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 GLULP15104 373 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 CALRP27797 417 aaKnown RBP19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 CCR3P51677 355 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 GRIK2Q13002 908 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 CCINQ13939 588 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 MAP7D1Q3KQU3 841 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 OR56A3Q8NH54 315 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 OR4K3Q96R72 315 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 PKP2Q99959 881 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 Q9H521 79 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 FZD3Q9NPG1 666 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 PHPT1Q9NRX4 125 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms