RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 ZNHIT6Q9NWK9 470 aaKnown RBP9.44□□□□□ -0.9
LRTM1-201ENST00000273286 DDX56Q9NY93 547 aaKnown RBP9.44□□□□□ -0.9
LRTM1-201ENST00000273286 SLC23A2Q9UGH3 650 aa9.44□□□□□ -0.9
LRTM1-201ENST00000273286 RARRES3Q9UL19 164 aa9.44□□□□□ -0.9
LRTM1-201ENST00000273286 NENFQ9UMX5 172 aa9.44□□□□□ -0.9
LRTM1-201ENST00000273286 TP53TG5Q9Y2B4 290 aa9.44□□□□□ -0.9
LRTM1-201ENST00000273286 MAN2B2Q9Y2E5 1009 aa9.44□□□□□ -0.9
LRTM1-201ENST00000273286 DNAJC16Q9Y2G8 782 aa9.44□□□□□ -0.9
LRTM1-201ENST00000273286 SLC30A1Q9Y6M5 507 aa9.44□□□□□ -0.9
LRTM1-201ENST00000273286 SPTBN1Q01082 2364 aaKnown RBP9.44□□□□□ -0.9
LRTM1-201ENST00000273286 RELNP78509 3460 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 TLCD2A6NGC4 264 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 KATNA1O75449 491 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 SLC4A1P02730 911 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 BRAFP15056 766 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 GRK2P25098 689 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 GRK3P35626 688 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 SPAM1P38567 509 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 LEPRP48357 1165 aaKnown RBP9.43□□□□□ -0.9
LRTM1-201ENST00000273286 RPS15P62841 145 aaKnown RBP9.43□□□□□ -0.9
LRTM1-201ENST00000273286 DNASE1L3Q13609 305 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 TFDP2Q14188 446 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 ERV3-1Q14264 604 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 SEPT7Q16181 437 aaKnown RBP9.43□□□□□ -0.9
LRTM1-201ENST00000273286 LONRF2Q1L5Z9 754 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 IRGCQ6NXR0 463 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 ASB18Q6ZVZ8 466 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 C11orf96Q7Z7L8 435 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 HPS6Q86YV9 775 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 DDHD1Q8NEL9 900 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 RAPGEF5Q92565 580 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 MIB2Q96AX9 1013 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 MBD6Q96DN6 1003 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 TEKT5Q96M29 485 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 KRTAP3-1Q9BYR8 98 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 ZNF106Q9H2Y7 1883 aaKnown RBP9.43□□□□□ -0.9
LRTM1-201ENST00000273286 GLOD4Q9HC38 313 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 ARFGAP3Q9NP61 516 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 FAM153AQ9UHL3 310 aa9.43□□□□□ -0.9
LRTM1-201ENST00000273286 G3BP2Q9UN86 482 aaKnown RBP9.43□□□□□ -0.9
LRTM1-201ENST00000273286 PIPSLA2A3N6 862 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 OR52A4PA6NMU1 304 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 CYSRT1A8MQ03 144 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 MATN2O00339 956 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 VPS4BO75351 444 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 PIRTP0C851 137 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 HLA-DPA1P20036 260 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 F8A1P23610 371 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 DRG2P55039 364 aaKnown RBP9.42□□□□□ -0.9
LRTM1-201ENST00000273286 TUBB4BP68371 445 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 HSD11B2P80365 405 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 SEMA5AQ13591 1074 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 TUBB2AQ13885 445 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 MESDQ14696 234 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 IGFBP7Q16270 282 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 UGT8Q16880 541 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 ATP13A5Q4VNC0 1218 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 TMTC4Q5T4D3 741 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 ATP1A1-AS1Q5TC04 95 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 TRMT10BQ6PF06 316 aaKnown RBP9.42□□□□□ -0.9
LRTM1-201ENST00000273286 FAM92BQ6ZTR7 304 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 SYVN1Q86TM6 617 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 RHOT1Q8IXI2 618 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 OR8K1Q8NGG5 319 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 SLC35G2Q8TBE7 412 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 LRFN5Q96NI6 719 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 FERMT1Q9BQL6 677 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 TUBB2BQ9BVA1 445 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 SSBP3Q9BWW4 388 aaPredicted RBP9.42□□□□□ -0.9
LRTM1-201ENST00000273286 SYTL2Q9HCH5 934 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 FGF21Q9NSA1 209 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 SMOXQ9NWM0 555 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 VPS4AQ9UN37 437 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 PKP3Q9Y446 797 aa9.42□□□□□ -0.9
LRTM1-201ENST00000273286 PCDHGA9Q9Y5G4 932 aaKnown RBP9.42□□□□□ -0.9
LRTM1-201ENST00000273286 MRPS18BQ9Y676 258 aaKnown RBP9.42□□□□□ -0.9
LRTM1-201ENST00000273286 USP9XQ93008 2570 aaPredicted RBP9.41□□□□□ -0.9
LRTM1-201ENST00000273286 GLYATL1P3A0A0U1RQE8 302 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 LOC285095A0A1B0GVY8 99 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 UBA6A0AVT1 1052 aaPredicted RBP9.41□□□□□ -0.9
LRTM1-201ENST00000273286 SYCE3A1L190 88 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 C3orf70A6NLC5 250 aaPredicted RBP9.41□□□□□ -0.9
LRTM1-201ENST00000273286 KIF1CO43896 1103 aaKnown RBP9.41□□□□□ -0.9
LRTM1-201ENST00000273286 AKR1B10O60218 316 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 MTX2O75431 263 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 PMPCBO75439 489 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 ZBTB11O95625 1053 aaPredicted RBP9.41□□□□□ -0.9
LRTM1-201ENST00000273286 MT-CYBP00156 380 aaPredicted RBP9.41□□□□□ -0.9
LRTM1-201ENST00000273286 KLK3P07288 261 aaPredicted RBP9.41□□□□□ -0.9
LRTM1-201ENST00000273286 TPM1P09493 284 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 NDUFS1P28331 727 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 GSDMDP57764 484 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 MPP3Q13368 585 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 DNTTIP2Q5QJE6 756 aaKnown RBP9.41□□□□□ -0.9
LRTM1-201ENST00000273286 CPZQ66K79 652 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 ARMC6Q6NXE6 501 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 GLT6D1Q7Z4J2 308 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 LUZP1Q86V48 1076 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 OOSP2Q86WS3 158 aa9.41□□□□□ -0.9
LRTM1-201ENST00000273286 RFX6Q8HWS3 928 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms