RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 GET4Q7L5D6 327 aaPredicted RBP9.55□□□□□ -0.88
CTDSPL2-201ENST00000260327 PPIL3Q9H2H8 161 aaKnown RBP9.55□□□□□ -0.88
CTDSPL2-201ENST00000260327 FBRSL1Q9HCM7 1045 aaKnown RBP9.55□□□□□ -0.88
CTDSPL2-201ENST00000260327 SERPINA3P01011 423 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 HSPB3Q12988 150 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 PPP1R3AQ16821 1122 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZNF782Q6ZMW2 699 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ATAD1Q8NBU5 361 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 OR6C4Q8NGE1 309 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 PPTC7Q8NI37 304 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 SLC16A10Q8TF71 515 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 RNF31Q96EP0 1072 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 CGREF1Q99674 301 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 BRD7Q9NPI1 651 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 RFPL1O75677 317 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 APOC1P02654 83 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ARSFP54793 590 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 RPS14P62263 151 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 HMGCS1Q01581 520 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZNF181Q2M3W8 571 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 C9orf64Q5T6V5 341 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 FBXL19Q6PCT2 694 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZNF598Q86UK7 904 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 RFKQ969G6 155 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 MGME1Q9BQP7 344 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 SLC39A1Q9NY26 324 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 NUDT4Q9NZJ9 180 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 NDOR1Q9UHB4 597 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 OR10H1Q9Y4A9 318 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 RGPD8O14715 1765 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 COL1A1P02452 1464 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 FAM47E-STBD1D6RA91 191 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 INMT-MINDY4F8WBC2 141 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 TLR4O00206 839 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 PQBP1O60828 265 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 FGBP02675 491 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 RPN2P04844 631 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 GMPRP36959 345 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 DUSP4Q13115 394 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 TARBP2Q15633 366 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 PIM3Q86V86 326 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZBTB2Q8N680 514 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 DENND6BQ8NEG7 585 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 OR7D4Q8NG98 312 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 SLC38A4Q969I6 547 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ARMC5Q96C12 935 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 BTN2A3PQ96KV6 586 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 POLR2J3Q9H1A7 115 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 NMUR1Q9HB89 426 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 RIMBP3CA6NJZ7 1639 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 RIMBP3BA6NNM3 1639 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 RIMBP3Q9UFD9 1639 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 A8MU76 341 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 HCRTO43612 131 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 CHRM1P11229 460 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 FGF3P11487 239 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 DAOAP59103 153 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ERVK-8P63133 956 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 OR2T5Q6IEZ7 315 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 POMZP3Q6PJE2 187 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 FOXRED2Q8IWF2 684 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZC3H3Q8IXZ2 948 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 SRFBP1Q8NEF9 429 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 OR2T29Q8NH02 315 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 FBXO27Q8NI29 283 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 FBXL18Q96ME1 805 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 HNRNPABQ99729 332 aaKnown RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 CST11Q9H112 138 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 MMP27Q9H306 513 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 C1orf109Q9NX04 203 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 TREHO43280 583 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 CDK4P11802 303 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 XKP51811 444 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZNF132P52740 706 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 NDST2P52849 883 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 PGGT1BP53609 377 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 HERVK_113P63132 956 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZNF45Q02386 682 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 NFATC3Q12968 1075 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ATXN7L3Q14CW9 347 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZMYND11Q15326 602 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ZNHIT3Q15649 155 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 DPY19L3Q6ZPD9 716 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 INO80EQ8NBZ0 244 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 ERVK-6Q9BXR3 956 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 HCN2Q9UL51 889 aa9.54□□□□□ -0.88
CTDSPL2-201ENST00000260327 AKAP8O43823 692 aaKnown RBP9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 IMPDH1P20839 514 aa9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 RPIAP49247 311 aa9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 AFF1P51825 1210 aaKnown RBP9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 SMAD3P84022 425 aaKnown RBP9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 KLHL22Q53GT1 634 aa9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 WDR45BQ5MNZ6 344 aa9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 OR52E8Q6IFG1 317 aa9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 NAPRTQ6XQN6 538 aa9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 BEND5Q7L4P6 421 aa9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 OXR1Q8N573 874 aa9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 OR13C4Q8NGS5 318 aa9.53□□□□□ -0.88
CTDSPL2-201ENST00000260327 SLC9A6Q92581 669 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 268.5 ms