RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 PBLDP30039 288 aaPredicted RBP21.07■□□□□ 0.96
CLN6-201ENST00000249806 GSTT1P30711 240 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 ST8SIA6P61647 398 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 SYTL3Q4VX76 610 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 RUNDC3AQ59EK9 446 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 LDLRAP1Q5SW96 308 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 TMTC4Q5T4D3 741 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 THEMIS2Q5TEJ8 643 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 ERAP2Q6P179 960 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 GALNT13Q8IUC8 556 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 RIMKLAQ8IXN7 391 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 FBXL8Q96CD0 374 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 AURKBQ96GD4 344 aaPredicted RBP21.07■□□□□ 0.96
CLN6-201ENST00000249806 VPS50Q96JG6 964 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 HPS4Q9NQG7 708 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 NFKBIL1Q9UBC1 381 aaPredicted RBP21.07■□□□□ 0.96
CLN6-201ENST00000249806 PPT2Q9UMR5 302 aa21.07■□□□□ 0.96
CLN6-201ENST00000249806 PSIP1O75475 530 aaKnown RBP21.06■□□□□ 0.96
CLN6-201ENST00000249806 RASAL1O95294 804 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 LDLRP01130 860 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 GSNP06396 782 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 ANXA6P08133 673 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 PCNAP12004 261 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 ETS2P15036 469 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 RPL10P27635 214 aaKnown RBP21.06■□□□□ 0.96
CLN6-201ENST00000249806 IRF8Q02556 426 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 APOFQ13790 326 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 NADK2Q4G0N4 442 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 PSRC1Q6PGN9 363 aaPredicted RBP21.06■□□□□ 0.96
CLN6-201ENST00000249806 TMEM220Q6QAJ8 160 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 TMC5Q6UXY8 1006 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 THOC6Q86W42 341 aaKnown RBP21.06■□□□□ 0.96
CLN6-201ENST00000249806 FAM86B1Q8N7N1 296 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 FAM47BQ8NA70 645 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 BPIFB1Q8TDL5 484 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 CMTM7Q96FZ5 175 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 VPS35Q96QK1 796 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 CAAP1Q9H8G2 361 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 SERHLQ9NQF3 203 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 RAD18Q9NS91 495 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 XIRP2A4UGR9 3374 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 LRRK1Q38SD2 2015 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 TRANK1O15050 2925 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 PLK4O00444 970 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 WNT9AO14904 365 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 FESP07332 822 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 CDH1P12830 882 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 JUPP14923 745 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 MERTKQ12866 999 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 NAE1Q13564 534 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 PGS1Q32NB8 556 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 TBPL2Q6SJ96 375 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 GCNT7Q6ZNI0 430 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 TRIM74Q86UV6 250 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 SFTPA1Q8IWL2 248 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 C10orf111Q8N326 155 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 ZNF548Q8NEK5 533 aaPredicted RBP21.06■□□□□ 0.96
CLN6-201ENST00000249806 HERVK_113Q902F9 699 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 ERLEC1Q96DZ1 483 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 MED8Q96G25 268 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 INPP5KQ9BT40 448 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 ADI1Q9BV57 179 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 TMEM106CQ9BVX2 250 aa21.06■□□□□ 0.96
CLN6-201ENST00000249806 PAIP1Q9H074 479 aaKnown RBP21.06■□□□□ 0.96
CLN6-201ENST00000249806 CARS2Q9HA77 564 aaKnown RBP21.06■□□□□ 0.96
CLN6-201ENST00000249806 PAPOLBQ9NRJ5 636 aaKnown RBP21.06■□□□□ 0.96
CLN6-201ENST00000249806 E7EQ34 232 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 SPINT1O43278 529 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 ATG13O75143 517 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 AMD1P17707 334 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 S100A3P33764 101 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 BDKRB1P46663 353 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 XKR6Q5GH73 641 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 ADGRD2Q7Z7M1 963 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 VN1R2Q8NFZ6 395 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 MAGEE2Q8TD90 523 aaPredicted RBP21.05■□□□□ 0.96
CLN6-201ENST00000249806 SMG7Q92540 1137 aaKnown RBP21.05■□□□□ 0.96
CLN6-201ENST00000249806 CCM2Q9BSQ5 444 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 EBPLQ9BY08 206 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 GULP1Q9UBP9 304 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 INVSQ9Y283 1065 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 K7ESM1 405 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 GSTA4O15217 222 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 H6PDO95479 791 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 CLIC3O95833 236 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 ADH1CP00326 375 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 ASLP04424 464 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 PRPS2P11908 318 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 PRPH2P23942 346 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 PRLHRP49683 370 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 AGTRAPQ6RW13 159 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 PHOSPHO2Q8TCD6 241 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 HCAR2Q8TDS4 363 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 MTERF1Q99551 399 aaKnown RBP21.05■□□□□ 0.96
CLN6-201ENST00000249806 NTN4Q9HB63 628 aa21.05■□□□□ 0.96
CLN6-201ENST00000249806 TRBV5-3A0A0A0MS03 114 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 SMIM31A0A1B0GVY4 71 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 SLC5A10A0PJK1 596 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 C5orf67F2Z3F1 127 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 HOXC11O43248 304 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms