RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 P01810 119 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Ptger3P30557 365 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 HmgclP38060 325 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Polr2iP60898 125 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Hrh1P70174 488 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Dnal1Q05A62 190 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Tmc5Q32NZ6 967 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Itih2Q61703 946 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Dsg4Q7TMD7 1041 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Olfr26Q7TRB7 308 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 MaelQ8BVN9 434 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Piwil2Q8CDG1 971 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Usb1Q91W78 267 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 WwoxQ91WL8 414 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Gorasp1Q91X51 446 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 SardhQ99LB7 919 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Nudt17Q9CWD3 296 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Hm13Q9D8V0 378 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Olfr933Q9EQA0 308 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Aldh1a3Q9JHW9 512 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Htatip2Q9Z2G9 242 aa17.89■□□□□ 0.45
Trim47-202ENSMUST00000106441 Olfr1153A2AVC0 318 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Hk2O08528 917 aaKnown RBP17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 P01665 111 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 P01666 111 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Lire1P11260 357 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 C2P21180 760 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Gria1P23818 907 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Gabarapl2P60521 117 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 MtpnP62774 118 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Olfr1252Q7TQZ2 314 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 ChdhQ8BJ64 596 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Mettl3Q8C3P7 580 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Fam221bQ8C627 487 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Ago1Q8CJG1 857 aaKnown RBP17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Angptl7Q8R1Q3 337 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Vmn1r215Q8R264 300 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Rbms2Q8VC70 383 aaKnown RBP17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Serpinb11Q9CQV3 388 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Mrpl45Q9D0Q7 306 aaKnown RBP17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 KelQ9EQF2 713 aa17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 VapaQ9WV55 249 aaKnown RBP17.88■□□□□ 0.45
Trim47-202ENSMUST00000106441 Smok4aA0JLX3 433 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Fam131cA2ADB2 273 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 2210016F16RikG3X8U3 338 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 EomesO54839 707 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Akap3O88987 864 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Sh3pxd2aO89032 1124 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Fth1P09528 182 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Nfkb1P25799 971 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 S100a9P31725 113 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Neurog1P70660 244 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Rps3aP97351 264 aaKnown RBP17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Rab33aP97950 237 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Zfp560Q3URI6 754 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Mrm3Q5ND52 418 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Hesx1Q61658 185 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Nr6a1Q64249 495 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Fam126aQ6P9N1 521 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Olfr1036Q7TR85 310 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Ntmt1Q8R2U4 223 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Adgrf1Q8VEC3 908 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Col26a1Q91VF6 440 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Chid1Q922Q9 393 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Pwp1Q99LL5 501 aaKnown RBP17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 DlstQ9D2G2 454 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Q9DAD0 168 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Fads3Q9JJE7 449 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Hs6st1Q9QYK5 411 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Numa1E9Q7G0 2094 aaKnown RBP17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Kat6aQ8BZ21 2003 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Gm4450E9Q007 373 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Vmn2r54K7N649 806 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 F3P20352 294 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Pcmt1P23506 227 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Vps26aP40336 327 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Hsd17b4P51660 735 aaKnown RBP17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 PtpaP58389 323 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Mkl2P59759 1080 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 EpycP70186 322 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Fgf13P70377 245 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 MybphP70402 483 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Cpne9Q1RLL3 553 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Glb1l2Q3UPY5 636 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Prss53Q571E5 552 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Gngt2Q61017 69 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Hsd3b4Q61767 373 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Map3k10Q66L42 940 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Kif18bQ6PFD6 834 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Slc39a4Q78IQ7 660 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 GmppbQ8BTZ7 360 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Lsm1Q8VC85 133 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Pcdhb8Q91XZ2 779 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Mri1Q9CQT1 369 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Dhrs7Q9CXR1 338 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Phf10Q9D8M7 497 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Hapln2Q9ESM3 341 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Ap3m1Q9JKC8 418 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Nufip1Q9QXX8 484 aa17.87■□□□□ 0.45
Trim47-202ENSMUST00000106441 Ak1Q9R0Y5 194 aa17.87■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms