RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Gpr149Q3UVY1 732 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Angptl1Q640P2 490 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Lix1Q6P566 282 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Paqr3Q6TCG8 311 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gpr171Q8BG55 319 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Insig1Q8BGI3 259 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Zmym6Q8BS54 1249 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Adnp2Q8CHC8 1165 aaKnown RBP15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr371Q8VGB8 312 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr352Q8VGJ9 315 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Art4Q9CRA0 300 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cby3Q9CVN6 235 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Alg14Q9D081 217 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Dnajb9Q9QYI6 222 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Katna1Q9WV86 491 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Fgf10O35565 209 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Nr4a2Q06219 598 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 MamstrQ0ZCJ7 421 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Zfp560Q3URI6 754 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cox8aQ64445 69 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Zmpste24Q80W54 475 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 4921511C20RikQ8BVT7 469 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Txndc11Q8K2W3 948 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Slc44a3Q921V7 656 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Dpy30Q99LT0 99 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Itgb3bpQ9CQ82 176 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Upk3bl1Q9D701 249 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Erap1Q9EQH2 930 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Enpp2Q9R1E6 862 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Slc43a3A2AVZ9 502 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Vmn2r114E9Q281 856 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr319L7MTY4 306 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Pole2O54956 527 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ptger3P30557 365 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tead2P48301 445 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 PtnP63089 168 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Kcnj8P97794 424 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Sap25Q1EHW4 186 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Mapkapk3Q3UMW7 384 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Trim62Q80V85 475 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Prap1Q80XD8 149 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Abhd18Q8C1A9 464 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Kcnc4Q8R1C0 628 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr854Q8VFF1 315 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr398Q8VFY0 314 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Uqcc2Q9CQY6 136 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tmed11Q9D2R4 215 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Slc39a5Q9D856 535 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Prl5a1Q9JII2 230 aa15.85■□□□□ 0.13
Trim28-201ENSMUST00000005705 Pramef25A2ASI9 494 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Vmn2r22E9Q7S8 853 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gm9857F7CXR1 130 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 PargO88622 969 aaKnown RBP15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Oas1aP11928 367 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 LchnQ3UHG7 455 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cdkn2cQ60772 168 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ephx4Q6IE26 359 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Maml1Q6T264 1020 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Q8BH50 245 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Rab39aQ8BHD0 217 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Map4k5Q8BPM2 847 aaKnown RBP15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Fignl1Q8BPY9 683 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Vmn1r38Q8R2E1 302 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Nudt17Q9CWD3 296 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Eif3fQ9DCH4 361 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 RgrQ9Z2B3 291 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Tsc22d3Q9Z2S7 137 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Unc13cQ8K0T7 2210 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gabrr3B2RXA8 464 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Cyp8b1O88962 500 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ugt2b17P17717 530 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 TecP24604 630 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Hpcal1P62748 193 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Il11ra2P70225 432 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Gdpgp1Q3TLS3 386 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Med26Q7TN02 588 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr664Q7TRP5 306 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Rcn3Q8BH97 328 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Nuak2Q8BZN4 639 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 ScaiQ8C8N2 606 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 AcppQ8CE08 381 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Prmt5Q8CIG8 637 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Kdelr3Q8R1L4 214 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Golga7Q91W53 137 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Ugt2b38Q91WH2 530 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 Armc8Q9DBR3 673 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 CroccQ8CJ40 2009 aa15.84■□□□□ 0.13
Trim28-201ENSMUST00000005705 TagapB2RWW0 714 aa15.83■□□□□ 0.13
Trim28-201ENSMUST00000005705 SelenovD3YXG1 328 aa15.83■□□□□ 0.13
Trim28-201ENSMUST00000005705 LifP09056 203 aa15.83■□□□□ 0.13
Trim28-201ENSMUST00000005705 RimklaQ6PFX8 380 aa15.83■□□□□ 0.13
Trim28-201ENSMUST00000005705 Smad3Q8BUN5 425 aa15.83■□□□□ 0.13
Trim28-201ENSMUST00000005705 Sf3b4Q8QZY9 424 aaKnown RBP15.83■□□□□ 0.13
Trim28-201ENSMUST00000005705 Vmn1r33Q8R2E0 305 aa15.83■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr357Q8VFP4 308 aa15.83■□□□□ 0.13
Trim28-201ENSMUST00000005705 Olfr691Q8VGW5 322 aa15.83■□□□□ 0.13
Trim28-201ENSMUST00000005705 Q9CPZ3 230 aa15.83■□□□□ 0.13
Trim28-201ENSMUST00000005705 Iqca1lA6H690 825 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 5830411N06RikB3F5L4 1112 aa15.83■□□□□ 0.12
Trim28-201ENSMUST00000005705 Sap18O55128 153 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms