RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Rad51Q08297 339 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Prmt9Q3U3W5 846 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Foxk2Q3UCQ1 651 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Defb28Q3V2L0 89 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Stox2Q499E5 926 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Mocs1Q5RKZ7 636 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 PtprnQ60673 979 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Pon2Q62086 354 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 OmpQ64288 163 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Larp4bQ6A0A2 741 aaKnown RBP14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Rasgrp3Q6NZH9 691 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Tnpo3Q6P2B1 923 aaKnown RBP14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Znf32Q80V23 272 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 RbsnQ80Y56 783 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 RalylQ8BTF8 293 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Zhx3Q8C0Q2 951 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Lrp11Q8CB67 483 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Slc45a3Q8K0H7 553 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Dcun1d3Q8K0V2 304 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Trnt1Q8K1J6 434 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Olfr315Q8VFG7 309 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Cdc42ep1Q91W92 409 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 NgrnQ99KS2 293 aaKnown RBP14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Psmd9Q9CR00 222 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Mrps22Q9CXW2 359 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Ccdc130Q9D516 385 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Tmigd1Q9D7L8 261 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Pfn3Q9DAD6 137 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Dmrt1Q9QZ59 374 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Akap8lQ9R0L7 642 aaKnown RBP14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Mbd4Q9Z2D7 554 aa14.29□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Znf318Q99PP2 2237 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Alms1Q8K4E0 3251 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Nipsnap3aB1AWZ3 247 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Phf11bB4XVQ1 276 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Zbtb10E9Q8X5 861 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 2210016F16RikG3X8U3 338 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Zfp607bG3X9H3 648 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Vmn2r12L7N217 831 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Galnt1O08912 559 aaKnown RBP14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Tpst2O88856 376 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Anxa6P14824 673 aaKnown RBP14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Hoxb9P20615 250 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 BckdhaP50136 442 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Naa20P61600 178 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 HnrnpkP61979 463 aaKnown RBP14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 ElocP83940 112 aaKnown RBP14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 RalgdsQ03385 852 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Prss48Q14B25 312 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Cdv3Q4VAA2 281 aaKnown RBP14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Slc10a7Q5PT53 340 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Itm2aQ61500 263 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 GcgrQ61606 485 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Drd1Q61616 446 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Il1rapQ61730 570 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Muc19Q6JHY2 733 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Olfr1418Q7TQS3 318 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 ChfrQ810L3 664 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Eme1Q8BJW7 570 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Fjx1Q8BQB4 450 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 C1qtnf7Q8BVD7 289 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Trim35Q8C006 501 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Bpifb2Q8C1E1 462 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Pias2Q8C5D8 621 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Clip4Q8CI96 704 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Cdc16Q8R349 620 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Hdac11Q91WA3 347 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Pcdhb8Q91XZ2 779 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 GzmnQ920S1 248 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Nipsnap3bQ9CQE1 247 aa14.28□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Zfp612A0A1D5RMC2 672 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 UprtB1AVZ0 310 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Chst13D3Z6E3 336 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Lrrc10bG3XA50 292 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Grk6O70293 576 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 CatP24270 527 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Kir3dl1P83555 432 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 PrkcqQ02111 707 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Cep76Q0VEJ0 659 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Satb1Q60611 764 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Cep78Q6IRU7 790 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 DgkbQ6NS52 802 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Fbxl19Q6PB97 674 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Smg5Q6ZPY2 1017 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 GanabQ8BHN3 944 aaKnown RBP14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Stbd1Q8C7E7 338 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Rpusd1Q8VCZ8 306 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Q99KU6 348 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Nsmce3Q9CPR8 279 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Wdr55Q9CX97 388 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Nudt14Q9D142 222 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 5330417H12RikQ9D3P2 110 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Terb2Q9D494 218 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Pnp2Q9D8C9 305 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Atp5oQ9DB20 213 aaKnown RBP14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Olfr630Q9EQQ7 319 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Cdh13Q9WTR5 714 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 Pdcd7Q9WTY1 482 aa14.27□□□□□ -0.12
Ercc1-201ENSMUST00000003645 F8Q06194 2319 aa14.27□□□□□ -0.13
Ercc1-201ENSMUST00000003645 Lrp4Q8VI56 1905 aa14.27□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms