RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 RAD51AP1Q96B01 352 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 MFSD3Q96ES6 412 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 PBKQ96KB5 322 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 FOPNLQ96NB1 174 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 GBP5Q96PP8 586 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 ENAMQ9NRM1 1142 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 INTS7Q9NVH2 962 aaKnown RBP15.22■□□□□ 0.03
VRK3-221ENST00000600284 SYBUQ9NX95 663 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 SLC39A10Q9ULF5 831 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 G3BP2Q9UN86 482 aaKnown RBP15.22■□□□□ 0.03
VRK3-221ENST00000600284 JRKLQ9Y4A0 524 aa15.22■□□□□ 0.03
VRK3-221ENST00000600284 MAGEB16A2A368 324 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 HCRTR1O43613 425 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 KLF7O75840 302 aaPredicted RBP15.21■□□□□ 0.03
VRK3-221ENST00000600284 CBSLP0DN79 551 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 PAMP19021 973 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 CBSP35520 551 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 CCNFP41002 786 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 PGDP52209 483 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 KCNJ11Q14654 390 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 TYSND1Q2T9J0 566 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 DEFB110Q30KQ9 67 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 ZC3H12BQ5HYM0 836 aaKnown RBP15.21■□□□□ 0.03
VRK3-221ENST00000600284 CPZQ66K79 652 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 KIAA0930Q6ICG6 404 aaPredicted RBP15.21■□□□□ 0.03
VRK3-221ENST00000600284 RAB42Q8N4Z0 105 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 ZBTB2Q8N680 514 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 DLG3Q92796 817 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 ZUFSPQ96AP4 578 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 BIRC8Q96P09 236 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 NDC1Q9BTX1 674 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 TXLNGQ9NUQ3 528 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 EURLQ9NYK6 297 aa15.21■□□□□ 0.03
VRK3-221ENST00000600284 GPN3Q9UHW5 284 aaPredicted RBP15.21■□□□□ 0.03
VRK3-221ENST00000600284 TTC7AQ9ULT0 858 aaPredicted RBP15.21■□□□□ 0.03
VRK3-221ENST00000600284 TCRBV7S3A2A0A539 114 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 TARM1B6A8C7 271 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 PRICKLE3O43900 615 aaPredicted RBP15.2■□□□□ 0.02
VRK3-221ENST00000600284 C1orf105O95561 183 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 IGHEP01854 428 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 ESR1P03372 595 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 PDGFAP04085 211 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 MLNP12872 115 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 OGNP20774 298 aaKnown RBP15.2■□□□□ 0.02
VRK3-221ENST00000600284 MAGP20916 626 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 ATP5DP30049 168 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 ARSFP54793 590 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 EIF3BP55884 814 aaKnown RBP15.2■□□□□ 0.02
VRK3-221ENST00000600284 GPS1Q13098 491 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 MCATQ8IVS2 390 aaKnown RBP15.2■□□□□ 0.02
VRK3-221ENST00000600284 OTUD6BQ8N6M0 293 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 ZNF655Q8N720 491 aaPredicted RBP15.2■□□□□ 0.02
VRK3-221ENST00000600284 HMGCLL1Q8TB92 370 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 LPGAT1Q92604 370 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 NAP1L3Q99457 506 aaPredicted RBP15.2■□□□□ 0.02
VRK3-221ENST00000600284 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.2■□□□□ 0.02
VRK3-221ENST00000600284 IFT80Q9P2H3 777 aaPredicted RBP15.2■□□□□ 0.02
VRK3-221ENST00000600284 VPS9D1Q9Y2B5 631 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 ZNF451Q9Y4E5 1061 aa15.2■□□□□ 0.02
VRK3-221ENST00000600284 UBR5O95071 2799 aaPredicted RBP15.2■□□□□ 0.02
VRK3-221ENST00000600284 MATN4O95460 622 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 KRT14P02533 472 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 FMO4P31512 558 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 GCGRP47871 477 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 CD97P48960 835 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 CHAF1BQ13112 559 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 GBX1Q14549 363 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 SF1Q15637 639 aaKnown RBP15.19■□□□□ 0.02
VRK3-221ENST00000600284 TRIP13Q15645 432 aaPredicted RBP15.19■□□□□ 0.02
VRK3-221ENST00000600284 IGFBP7Q16270 282 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 NKAIN1Q4KMZ8 207 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 TCTE1Q5JU00 501 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 CTSL3PQ5NE16 218 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 YOD1Q5VVQ6 348 aaPredicted RBP15.19■□□□□ 0.02
VRK3-221ENST00000600284 MLIPQ5VWP3 458 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 FIGLAQ6QHK4 219 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 CES3Q6UWW8 571 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 LMNTD1Q8N9Z9 388 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 MCUQ8NE86 351 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 OR2Y1Q8NGV0 311 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 SKA2Q8WVK7 121 aaPredicted RBP15.19■□□□□ 0.02
VRK3-221ENST00000600284 MAGOHBQ96A72 148 aaKnown RBP15.19■□□□□ 0.02
VRK3-221ENST00000600284 MIB2Q96AX9 1013 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 NACC2Q96BF6 587 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 IL17FQ96PD4 163 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 IRAK4Q9NWZ3 460 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 DHCR7Q9UBM7 475 aaKnown RBP15.19■□□□□ 0.02
VRK3-221ENST00000600284 NDOR1Q9UHB4 597 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 KLK4Q9Y5K2 254 aa15.19■□□□□ 0.02
VRK3-221ENST00000600284 SETXQ7Z333 2677 aaKnown RBP15.19■□□□□ 0.02
VRK3-221ENST00000600284 FAM237BA0A1B0GVD1 139 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 SDR42E2A6NKP2 422 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 KLHL41O60662 606 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 SRPX2O60687 465 aaPredicted RBP15.18■□□□□ 0.02
VRK3-221ENST00000600284 AVILO75366 819 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 ONECUT2O95948 504 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 CTSBP07858 339 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 PIM1P11309 404 aaPredicted RBP15.18■□□□□ 0.02
VRK3-221ENST00000600284 FOLR3P41439 243 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 CYP1B1Q16678 543 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms