RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ANKRD49Q8WVL7 239 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 ZUFSPQ96AP4 578 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 FBXL8Q96CD0 374 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 LIN37Q96GY3 246 aaPredicted RBP8.78□□□□□ -1
CIRBP-218ENST00000588344 TGM7Q96PF1 710 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 PKP4Q99569 1192 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 MIPEPQ99797 713 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 MENTQ9BUN1 341 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 CAPS2Q9BXY5 557 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 CHRNA10Q9GZZ6 450 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 STMN4Q9H169 189 aaPredicted RBP8.78□□□□□ -1
CIRBP-218ENST00000588344 VPS11Q9H270 941 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 SYNDIG1Q9H7V2 258 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 CNOT10Q9H9A5 744 aaKnown RBP8.78□□□□□ -1
CIRBP-218ENST00000588344 INTS7Q9NVH2 962 aaKnown RBP8.78□□□□□ -1
CIRBP-218ENST00000588344 ACTR10Q9NZ32 417 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 OGFRQ9NZT2 677 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 SENP1Q9P0U3 644 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 LGALS13Q9UHV8 139 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 ATXN7L1Q9ULK2 861 aaPredicted RBP8.78□□□□□ -1
CIRBP-218ENST00000588344 TMCO1Q9UM00 188 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 PLAAQ9Y263 795 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 PCDHB11Q9Y5F2 797 aa8.78□□□□□ -1
CIRBP-218ENST00000588344 IGHV5-10-1A0A0J9YXX1 117 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 GSAPA4D1B5 854 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ISM1B1AKI9 464 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 TARM1B6A8C7 271 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 E7ENX8 843 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 CDC7O00311 574 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 BTN3A3O00478 584 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 KERAO60938 352 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 CSO75390 466 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 RASSF9O75901 435 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 IPO13O94829 963 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 CCNDBP1O95273 360 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ZBTB11O95625 1053 aaPredicted RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 S100BP04271 92 aaPredicted RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 TPBGLP0DKB5 382 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 THRAP10827 490 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 HOXB3P14651 431 aaPredicted RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 OAS2P29728 719 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 CSTF2P33240 577 aaKnown RBP eCLIP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 RPA3P35244 121 aaPredicted RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 GGT5P36269 586 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 MLLT3P42568 568 aaPredicted RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 BDKRB1P46663 353 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 SLCO1A2P46721 670 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ARL4DP49703 201 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 HSD11B2P80365 405 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ABATP80404 500 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 TAP2Q03519 686 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 CFHR1Q03591 330 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 TARDBPQ13148 414 aaKnown RBP eCLIP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 TGFBIQ15582 683 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 TSNQ15631 228 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 SF1Q15637 639 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 PPP1R3AQ16821 1122 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 SLC5A12Q1EHB4 618 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 TMTC4Q5T4D3 741 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 PHF19Q5T6S3 580 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 CACHD1Q5VU97 1274 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 SULT1C3Q6IMI6 304 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 CAPN13Q6MZZ7 669 aaPredicted RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 IRGCQ6NXR0 463 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 METTL2BQ6P1Q9 378 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 SPESP1Q6UW49 350 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ZNF574Q6ZN55 896 aaPredicted RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ARHGAP22Q7Z5H3 698 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 LSMEM2Q8N112 164 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 CHCHD4Q8N4Q1 142 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 LMNTD1Q8N9Z9 388 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ZNF480Q8WV37 535 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 KLHL6Q8WZ60 621 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 RSC1A1Q92681 617 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 DLG3Q92796 817 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ALKBH8Q96BT7 664 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 NXNL1Q96CM4 212 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 MRPL57Q9BQC6 102 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 NUDT22Q9BRQ3 303 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 HAUS8Q9BT25 410 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 B3GNT4Q9C0J1 378 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 NRSN2Q9GZP1 204 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 SEMA6CQ9H3T2 930 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ZNF768Q9H5H4 540 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 XKR8Q9H6D3 395 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 IGSF5Q9NSI5 407 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 EURLQ9NYK6 297 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 TBK1Q9UHD2 729 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 TSR3Q9UJK0 312 aaKnown RBP8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ADAMTS6Q9UKP5 1117 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 POMT2Q9UKY4 750 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 GRID1Q9ULK0 1009 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 RNF112Q9ULX5 631 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 NEUROG3Q9Y4Z2 214 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 KLK4Q9Y5K2 254 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 MYLKQ15746 1914 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 ADAMTS9Q9P2N4 1935 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 PLXNB3Q9ULL4 1909 aa8.77□□□□□ -1.01
CIRBP-218ENST00000588344 LRP4O75096 1905 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms