RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 FLNCQ14315 2725 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 PTPN13Q12923 2485 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 TCRBV7S3A2A0A539 114 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 GOLGA6L6A8MZA4 724 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 GOLGA8KD6RF30 607 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 GOLGA8TH3BQL2 631 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 SORBS2O94875 1100 aaKnown RBP13.79□□□□□ -0.2
VMP1-206ENST00000587945 SLCO2B1O94956 709 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 FGGP02679 453 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 ALAS2P22557 587 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 GNLYP22749 145 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 MGAT1P26572 445 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 FOLR3P41439 243 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 BDKRB1P46663 353 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 TTPAP49638 278 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 SSPNQ14714 243 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 NKAIN1Q4KMZ8 207 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 UNC5DQ6UXZ4 953 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 GSTA5Q7RTV2 222 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 OTUD6BQ8N6M0 293 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 RBMXL3Q8N7X1 1067 aaKnown RBP13.79□□□□□ -0.2
VMP1-206ENST00000587945 PROKR1Q8TCW9 393 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 C17orf62Q9BQA9 187 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 NDC1Q9BTX1 674 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 P2RY12Q9H244 342 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 EIF2B3Q9NR50 452 aaKnown RBP13.79□□□□□ -0.2
VMP1-206ENST00000587945 SLC22A11Q9NSA0 550 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 SYBUQ9NX95 663 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 GPR83Q9NYM4 423 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.79□□□□□ -0.2
VMP1-206ENST00000587945 NDOR1Q9UHB4 597 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 TSR3Q9UJK0 312 aaKnown RBP13.79□□□□□ -0.2
VMP1-206ENST00000587945 SLC39A10Q9ULF5 831 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 DRG1Q9Y295 367 aaKnown RBP13.79□□□□□ -0.2
VMP1-206ENST00000587945 NFS1Q9Y697 457 aa13.79□□□□□ -0.2
VMP1-206ENST00000587945 RASGRF2O14827 1237 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 VPS4BO75351 444 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 NDUFS3O75489 264 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 RPN2P04844 631 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 UMODP07911 640 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 ITGAXP20702 1163 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 MCM3P25205 808 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 ARNTP27540 789 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 RRADP55042 308 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 EIF3BP55884 814 aaKnown RBP13.78□□□□□ -0.2
VMP1-206ENST00000587945 TMED2Q15363 201 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 SF1Q15637 639 aaKnown RBP13.78□□□□□ -0.2
VMP1-206ENST00000587945 TRIP13Q15645 432 aaPredicted RBP13.78□□□□□ -0.2
VMP1-206ENST00000587945 CCSMST1Q4G0I0 132 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 FCRL6Q6DN72 434 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 JMJD6Q6NYC1 403 aaPredicted RBP13.78□□□□□ -0.2
VMP1-206ENST00000587945 DRICH1Q6PGQ1 229 aaPredicted RBP13.78□□□□□ -0.2
VMP1-206ENST00000587945 FIGLAQ6QHK4 219 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 Q8NA96 180 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 OR2L8Q8NGY9 312 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 SKA2Q8WVK7 121 aaPredicted RBP13.78□□□□□ -0.2
VMP1-206ENST00000587945 UBE2Q2Q8WVN8 375 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 FAM136AQ96C01 138 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 MFSD3Q96ES6 412 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 IL22Q9GZX6 179 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 BFARQ9NZS9 450 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 GNPTGQ9UJJ9 305 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 TTC7AQ9ULT0 858 aaPredicted RBP13.78□□□□□ -0.2
VMP1-206ENST00000587945 VPS4AQ9UN37 437 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 G3BP2Q9UN86 482 aaKnown RBP13.78□□□□□ -0.2
VMP1-206ENST00000587945 SRPK3Q9UPE1 567 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 MAP4K5Q9Y4K4 846 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 PCDHGB7Q9Y5F8 929 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 PCSK5Q92824 1860 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 DOPEY2Q9Y3R5 2298 aa13.78□□□□□ -0.2
VMP1-206ENST00000587945 BLACEA4D250 179 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 CEP104O60308 925 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 DPM1O60762 260 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 VAPBO95292 243 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 C1orf105O95561 183 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 S1PR4O95977 384 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 PSMB5P28074 263 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 FMO4P31512 558 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 CXCR5P32302 372 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 GCGRP47871 477 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 NPY2RP49146 381 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 INPP5JQ15735 1006 aaPredicted RBP13.77□□□□□ -0.21
VMP1-206ENST00000587945 CTSL3PQ5NE16 218 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 SLC6A19Q695T7 634 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 MRPL14Q6P1L8 145 aaKnown RBP13.77□□□□□ -0.21
VMP1-206ENST00000587945 TTLL10Q6ZVT0 673 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 OTOAQ7RTW8 1153 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 PPP1R32Q7Z5V6 425 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 OR2Y1Q8NGV0 311 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 GSDMBQ8TAX9 411 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.77□□□□□ -0.21
VMP1-206ENST00000587945 SLC22A18Q96BI1 424 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 PANX3Q96QZ0 392 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 SMAD5Q99717 465 aaKnown RBP13.77□□□□□ -0.21
VMP1-206ENST00000587945 SLAMF7Q9NQ25 335 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 P4HTMQ9NXG6 502 aa13.77□□□□□ -0.21
VMP1-206ENST00000587945 MED13Q9UHV7 2174 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 MAST4O15021 2626 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 PEX12O00623 359 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 PRICKLE3O43900 615 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms