RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 DENND6BQ8NEG7 585 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 TFGQ92734 400 aaPredicted RBP19.29■□□□□ 0.68
TRIM47-204ENST00000587339 USP7Q93009 1102 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 MAGEB10Q96LZ2 347 aaPredicted RBP19.29■□□□□ 0.68
TRIM47-204ENST00000587339 GUCD1Q96NT3 240 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 UHRF1Q96T88 793 aaPredicted RBP19.29■□□□□ 0.68
TRIM47-204ENST00000587339 SGK2Q9HBY8 427 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 MOSPD1Q9UJG1 213 aa19.29■□□□□ 0.68
TRIM47-204ENST00000587339 POM121BA6NF01 834 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 SLC28A1O00337 649 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 RGS14O43566 566 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 SNRPB2P08579 225 aaKnown RBP19.28■□□□□ 0.68
TRIM47-204ENST00000587339 NME5P56597 212 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 IRF8Q02556 426 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 CHIT1Q13231 466 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 RIPK1Q13546 671 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 SGO1Q5FBB7 561 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 SYT13Q7L8C5 426 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 TRIM46Q7Z4K8 759 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 GALNT13Q8IUC8 556 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 SCUBE1Q8IWY4 988 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 DEFB107AQ8IZN7 70 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 SLC25A23Q9BV35 468 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 MRPL1Q9BYD6 325 aaKnown RBP19.28■□□□□ 0.68
TRIM47-204ENST00000587339 ELOVL6Q9H5J4 265 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 AIG1Q9NVV5 245 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 EBF1Q9UH73 591 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 ACSL5Q9ULC5 683 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 SNX6Q9UNH7 406 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 CCL27Q9Y4X3 112 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 GPR45Q9Y5Y3 372 aa19.28■□□□□ 0.68
TRIM47-204ENST00000587339 FPGTO14772 594 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 UGDHO60701 494 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 WFS1O76024 890 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 SLC35G4P0C7Q5 338 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 RPL10P27635 214 aaKnown RBP19.27■□□□□ 0.68
TRIM47-204ENST00000587339 CLDN2P57739 230 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 PRKCQQ04759 706 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 DMPKQ09013 629 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 IMPG1Q17R60 797 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 AP5B1Q2VPB7 878 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 PUS10Q3MIT2 529 aaKnown RBP19.27■□□□□ 0.68
TRIM47-204ENST00000587339 MMEL1Q495T6 779 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 ULK2Q8IYT8 1036 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 SYNPOQ8N3V7 929 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 RAD51AP1Q96B01 352 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 PPP3R2Q96LZ3 170 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 OR4K3Q96R72 315 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 TIMM29Q9BSF4 260 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 C1orf50Q9BV19 199 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 OSGEPL1Q9H4B0 414 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 LMAN1LQ9HAT1 526 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 MRPL40Q9NQ50 206 aaKnown RBP19.27■□□□□ 0.68
TRIM47-204ENST00000587339 USP36Q9P275 1121 aaKnown RBP19.27■□□□□ 0.68
TRIM47-204ENST00000587339 SUFUQ9UMX1 484 aa19.27■□□□□ 0.68
TRIM47-204ENST00000587339 KCNE1BA0A087WTH5 132 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 PRAMEF4O60810 478 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 RPN2P04844 631 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 HNRNPA2B1P22626 353 aaKnown RBP19.27■□□□□ 0.67
TRIM47-204ENST00000587339 RAP1GDS1P52306 607 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 TFF2Q03403 129 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 GRIK2Q13002 908 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 ART3Q13508 389 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 XKR6Q5GH73 641 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 PRAMEF9Q5VWM5 478 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 LIPJQ5W064 366 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 CAPN13Q6MZZ7 669 aaPredicted RBP19.27■□□□□ 0.67
TRIM47-204ENST00000587339 C16orf89Q6UX73 402 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 FUNDC1Q8IVP5 155 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 DCUN1D3Q8IWE4 304 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 DSELQ8IZU8 1212 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 PHC3Q8NDX5 983 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 OR5AR1Q8NGP9 310 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 SELENOMQ8WWX9 145 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 MTFMTQ96DP5 389 aaKnown RBP19.27■□□□□ 0.67
TRIM47-204ENST00000587339 CLPTM1LQ96KA5 538 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 NPAS2Q99743 824 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 DENND2DQ9H6A0 471 aaPredicted RBP19.27■□□□□ 0.67
TRIM47-204ENST00000587339 NDE1Q9NXR1 346 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 BAIAP2L1Q9UHR4 511 aa19.27■□□□□ 0.67
TRIM47-204ENST00000587339 KANSL1LA0AUZ9 987 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 CHURC1-FNTBB4DL54 471 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 ATP6V1G2O95670 118 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 SEMA4FO95754 770 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 CLCNKAP51800 687 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 TBPL1P62380 186 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 EMX2Q04743 252 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 LRRC32Q14392 662 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 PYCR3Q53H96 274 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 ANO7Q6IWH7 933 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 ZNF687Q8N1G0 1237 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 DEFB123Q8N688 67 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 BRINP2Q9C0B6 783 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 GPSM3Q9Y4H4 160 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 CFAP20Q9Y6A4 193 aaKnown RBP19.26■□□□□ 0.67
TRIM47-204ENST00000587339 KCNE2Q9Y6J6 123 aa19.26■□□□□ 0.67
TRIM47-204ENST00000587339 A0A088AWK7 358 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 E7EQ34 232 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 CLGNO14967 610 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 TRIOO75962 3097 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms