RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 PCDHB3Q9Y5E6 796 aa10.53□□□□□ -0.72
NDEL1-208ENST00000580237 MDC1Q14676 2089 aaKnown RBP10.53□□□□□ -0.72
NDEL1-208ENST00000580237 PABPN1LA6NDY0 278 aaKnown RBP10.52□□□□□ -0.73
NDEL1-208ENST00000580237 FAM187AA6NFU0 413 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 E7EQ34 232 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 OR2B3O76000 313 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 C1orf105O95561 183 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 SYF2O95926 243 aaKnown RBP10.52□□□□□ -0.73
NDEL1-208ENST00000580237 ITGB2P05107 769 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 KLK3P07288 261 aaPredicted RBP10.52□□□□□ -0.73
NDEL1-208ENST00000580237 ENO3P13929 434 aaPredicted RBP10.52□□□□□ -0.73
NDEL1-208ENST00000580237 TCN2P20062 427 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 MAGP20916 626 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 RPL21P46778 160 aaKnown RBP10.52□□□□□ -0.73
NDEL1-208ENST00000580237 MRPS25P82663 173 aaKnown RBP10.52□□□□□ -0.73
NDEL1-208ENST00000580237 CDC20Q12834 499 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 PDIA2Q13087 525 aaKnown RBP10.52□□□□□ -0.73
NDEL1-208ENST00000580237 DNASE1L3Q13609 305 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 SF1Q15637 639 aaKnown RBP10.52□□□□□ -0.73
NDEL1-208ENST00000580237 ACSBG2Q5FVE4 666 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 UGT3A1Q6NUS8 523 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 CDHR3Q6ZTQ4 885 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 MAATS1Q7Z4T9 603 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 ANKMY2Q8IV38 441 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 SPATA4Q8NEY3 305 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 OR1L3Q8NH93 324 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 CT55Q8WUE5 264 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 EXTL1Q92935 676 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 LRRC39Q96DD0 335 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 PWWP2AQ96N64 755 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 BBC3Q96PG8 261 aaPredicted RBP10.52□□□□□ -0.73
NDEL1-208ENST00000580237 NDNQ99608 321 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 GPR21Q99679 349 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 SPRY4Q9C004 299 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 ACTR5Q9H9F9 607 aaPredicted RBP10.52□□□□□ -0.73
NDEL1-208ENST00000580237 LHX9Q9NQ69 397 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 SPATA7Q9P0W8 599 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 IL17BQ9UHF5 180 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 KCND3Q9UK17 655 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 SNX24Q9Y343 169 aa10.52□□□□□ -0.73
NDEL1-208ENST00000580237 CCDC88CQ9P219 2028 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 ATRXP46100 2492 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 KRT87PA6NCN2 255 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 ARHGEF33A8MVX0 844 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 RAD51CO43502 376 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 HBQ1P09105 142 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 MSL3P1P0C860 447 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 TPBGLP0DKB5 382 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 ATXN8OSP0DMR3 200 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 IVDP26440 423 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 OAS2P29728 719 aaKnown RBP10.51□□□□□ -0.73
NDEL1-208ENST00000580237 PEBP1P30086 187 aaKnown RBP10.51□□□□□ -0.73
NDEL1-208ENST00000580237 CARSP49589 748 aaKnown RBP10.51□□□□□ -0.73
NDEL1-208ENST00000580237 RGS4P49798 205 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 CLCN7P51798 805 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 RPS15P62841 145 aaKnown RBP10.51□□□□□ -0.73
NDEL1-208ENST00000580237 LY6DQ14210 128 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 CCSMST1Q4G0I0 132 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 LRRC8EQ6NSJ5 796 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 BORAQ6PGQ7 559 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 CAPN12Q6ZSI9 719 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 KIAA0408Q6ZU52 694 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 FAM20CQ8IXL6 584 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 PALM2Q8IXS6 379 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 CPNE9Q8IYJ1 553 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 ZBED8Q8IZ13 594 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 GPATCH11Q8N954 259 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 LMNTD1Q8N9Z9 388 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 LINC01555Q8NAE3 123 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 C2CD4AQ8NCU7 369 aaPredicted RBP10.51□□□□□ -0.73
NDEL1-208ENST00000580237 LSM14AQ8ND56 463 aaKnown RBP10.51□□□□□ -0.73
NDEL1-208ENST00000580237 GIMAP7Q8NHV1 300 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 CD200R1Q8TD46 325 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 ZNF592Q92610 1267 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 TTC9Q92623 222 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 INPP5DQ92835 1189 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 CATSPER2Q96P56 530 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 AARSD1Q9BTE6 412 aaKnown RBP10.51□□□□□ -0.73
NDEL1-208ENST00000580237 SLC12A9Q9BXP2 914 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 RAB17Q9H0T7 212 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 TXLNGQ9NUQ3 528 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 ABCF3Q9NUQ8 709 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 TAS2R13Q9NYV9 303 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 ZFATQ9P243 1243 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 SLC17A6Q9P2U8 582 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 GALPQ9UBC7 116 aa10.51□□□□□ -0.73
NDEL1-208ENST00000580237 UTP11Q9Y3A2 253 aaKnown RBP10.51□□□□□ -0.73
NDEL1-208ENST00000580237 MRPS18BQ9Y676 258 aaKnown RBP10.51□□□□□ -0.73
NDEL1-208ENST00000580237 ZNF839A8K0R7 811 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 C21orf140B9A014 251 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 C9J4A7 227 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 TK2O00142 265 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 NKX2-8O15522 239 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 ZSCAN9O15535 394 aaPredicted RBP10.5□□□□□ -0.73
NDEL1-208ENST00000580237 HAUS5O94927 633 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 MATN4O95460 622 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 PRB1P04280 392 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 CBSLP0DN79 551 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 MCM3P25205 808 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 PSMB5P28074 263 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms