RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 BTBD2Q9BX70 525 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 RBCK1Q9BYM8 510 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 SDHAF2Q9NX18 166 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 XRN1Q8IZH2 1706 aaKnown RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 CPSF4O95639 269 aaKnown RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 CHRM3P20309 590 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 RFTN2Q52LD8 501 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 MON1BQ7L1V2 547 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 RNF130Q86XS8 419 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 RAB42Q8N4Z0 105 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 RPL3LQ92901 407 aaKnown RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 TMEM41AQ96HV5 264 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 PI4K2AQ9BTU6 479 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 SDCBP2Q9H190 292 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 SLIT3O75094 1523 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ERCC6L2Q5T890 1561 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 TTLL8A6PVC2 850 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 WASHC1A8K0Z3 465 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 A8MU76 341 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 USP17L10C9JJH3 530 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 IMPA2O14732 288 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ULK1O75385 1050 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 SLC43A1O75387 559 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 GABARAPO95166 117 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 HOXA1P49639 335 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 GSK3BP49841 420 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 AIMP2Q13155 320 aaKnown RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 ZMYND11Q15326 602 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ZNF621Q6ZSS3 439 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 DCUN1D3Q8IWE4 304 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 SLC35F3Q8IY50 421 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 PHACTR4Q8IZ21 702 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 PLD5Q8N7P1 536 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 OR8J3Q8NGG0 315 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 BIRC7Q96CA5 298 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 AP1S3Q96PC3 154 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 CBWD1Q9BRT8 395 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 C14orf105Q9NVL8 296 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 TCRBV3S1A0A5B6 114 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ZNF705EA8MWA4 302 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 CAPN5O15484 640 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 HTR3BO95264 441 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 CRHBPP24387 322 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 C4orf46Q504U0 113 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 CBWD2Q8IUF1 395 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 CPXCR1Q8N123 301 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 NKX6-2Q9C056 277 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 CARS2Q9HA77 564 aaKnown RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 SEMA4BQ9NPR2 832 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 C1orf109Q9NX04 203 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 GULP1Q9UBP9 304 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 SSTR3P32745 418 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 GRIK2Q13002 908 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 CHRNA6Q15825 494 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 GOLGA7BQ2TAP0 167 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 TEX44Q53QW1 395 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 LYSMD3Q7Z3D4 306 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 KLHL36Q8N4N3 616 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 OR6S1Q8NH40 331 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 SCGB3A2Q96PL1 93 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 COX7A2P14406 83 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 HOXD10P28358 340 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 POU4F3Q15319 338 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 IL17AQ16552 155 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ZBTB37Q5TC79 503 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 FSTL4Q6MZW2 842 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 GPSM1Q86YR5 675 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ZNF607Q96SK3 696 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ZNF471Q9BX82 626 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 OR51J1Q9H342 316 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 XPNPEP1Q9NQW7 623 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 CISHQ9NSE2 258 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 RFXANKO14593 260 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 PER2O15055 1255 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 CDRT1O95170 752 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 ITGAMP11215 1152 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 MAGEA11P43364 429 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 TKTL1P51854 596 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 BCAT1P54687 386 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 MLLT6P55198 1093 aaPredicted RBP6.13□□□□□ -1.43
CLK3-212ENST00000563418 DNAJB13P59910 316 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 CAP1Q01518 475 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 SCARF1Q14162 830 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 RAB41Q5JT25 222 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 OR4D10Q8NGI6 311 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 GIMAP1Q8WWP7 306 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 ADGRE3Q9BY15 652 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 HOXC10Q9NYD6 342 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 GNG14A0A1W2PPG7 69 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 LCP1P13796 627 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 PPP3CBP16298 524 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 SLC2A5P22732 501 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 SLC6A2P23975 617 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 FAM124AQ86V42 546 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 SKA3Q8IX90 412 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 PAPD5Q8NDF8 572 aaKnown RBP6.13□□□□□ -1.43
CLK3-212ENST00000563418 ACOX2Q99424 681 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 RBFOX1Q9NWB1 397 aaKnown RBP6.13□□□□□ -1.43
CLK3-212ENST00000563418 OPTCQ9UBM4 332 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 BTRCQ9Y297 605 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms