RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 NXPE2Q96DL1 559 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 CCDC138Q96M89 665 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 CTRCQ99895 268 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 TRIM51Q9BSJ1 452 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 CEP41Q9BYV8 373 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 STRADBQ9C0K7 418 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 CHRAC1Q9NRG0 131 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 DNAJC28Q9NX36 388 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 SIDT1Q9NXL6 827 aaKnown RBP5.47□□□□□ -1.53
LINC01963-201ENST00000562038 NINJ2Q9NZG7 142 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 NUDT4Q9NZJ9 180 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 IL17BQ9UHF5 180 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 RABGEF1Q9UJ41 708 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 COQ6Q9Y2Z9 468 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 CCDC151A5D8V7 595 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 GOLGA8TH3BQL2 631 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 STX16-NPEPL1H3BU86 382 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 TRIM38O00635 465 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 TXNDC9O14530 226 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 STX16O14662 325 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 MAP3K6O95382 1288 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 FUCA1P04066 466 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 GNPDA1P46926 289 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 LSSP48449 732 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 PXNP49023 591 aaPredicted RBP5.47□□□□□ -1.53
LINC01963-201ENST00000562038 CLDN2P57739 230 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 GPX6P59796 221 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 TIAL1Q01085 375 aaKnown RBP eCLIP5.47□□□□□ -1.53
LINC01963-201ENST00000562038 PDIA2Q13087 525 aaKnown RBP5.47□□□□□ -1.53
LINC01963-201ENST00000562038 CCDC6Q16204 474 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 GGTA1PQ4G0N0 100 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 MSS51Q4VC12 460 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 KHDC1Q4VXA5 237 aaKnown RBP5.47□□□□□ -1.53
LINC01963-201ENST00000562038 ANKRD39Q53RE8 183 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 ANKS6Q68DC2 871 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 TMEM220Q6QAJ8 160 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 CYHR1Q6ZMK1 362 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 RNF44Q7L0R7 432 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 HPS6Q86YV9 775 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 SLC35F3Q8IY50 421 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 FLVCR1-AS1Q8TAF5 88 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 TTC9Q92623 222 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 ZUFSPQ96AP4 578 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 RAD51AP1Q96B01 352 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 ARL8AQ96BM9 186 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 ZDHHC12Q96GR4 267 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 FOPNLQ96NB1 174 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 GPATCH1Q9BRR8 931 aaKnown RBP5.47□□□□□ -1.53
LINC01963-201ENST00000562038 EFHD1Q9BUP0 239 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 SGPP1Q9BX95 441 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 OR2AG1Q9H205 316 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 CCDC68Q9H2F9 335 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 ANKZF1Q9H8Y5 726 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 C1GALT1Q9NS00 363 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 CPNE7Q9UBL6 633 aa5.47□□□□□ -1.53
LINC01963-201ENST00000562038 IGHV1OR21-1A0A087WYE8 117 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 TCRBV9S1A1TA0A576 114 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 OR5K3A6NET4 321 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 C4orf47A7E2U8 309 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 ATP8B1O43520 1251 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 TSPAN12O95859 305 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 ACPPP15309 386 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 IL10P22301 178 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 TSFMP43897 325 aaKnown RBP5.46□□□□□ -1.53
LINC01963-201ENST00000562038 UCNP55089 124 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 SESN3P58005 492 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 MC2RQ01718 297 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 SF3A2Q15428 464 aaKnown RBP5.46□□□□□ -1.53
LINC01963-201ENST00000562038 ZRANB3Q5FWF4 1079 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 THNSL2Q86YJ6 484 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 PELI3Q8N2H9 469 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 D2HGDHQ8N465 521 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 LMNTD1Q8N9Z9 388 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 OR56A3Q8NH54 315 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 RAB3IL1Q8TBN0 382 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 IFI44Q8TCB0 444 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 FBXO25Q8TCJ0 367 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 PROKR1Q8TCW9 393 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 LMX1AQ8TE12 382 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 ATP6V1E2Q96A05 226 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 MVB12AQ96EY5 273 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 MED8Q96G25 268 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 VPS39Q96JC1 886 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 CAPZA3Q96KX2 299 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 CCDC77Q9BR77 488 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 HAUS8Q9BT25 410 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 DPH1Q9BZG8 443 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 LRRC4CQ9HCJ2 640 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 C20orf96Q9NUD7 363 aaPredicted RBP5.46□□□□□ -1.53
LINC01963-201ENST00000562038 SIRT5Q9NXA8 310 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 UBP1Q9NZI7 540 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 OR1A2Q9Y585 309 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 PCDHGA6Q9Y5G7 932 aa5.46□□□□□ -1.53
LINC01963-201ENST00000562038 TTC24A2A3L6 582 aaPredicted RBP5.46□□□□□ -1.54
LINC01963-201ENST00000562038 CDRT15L2A8MXV6 281 aa5.46□□□□□ -1.54
LINC01963-201ENST00000562038 RIPK2O43353 540 aa5.46□□□□□ -1.54
LINC01963-201ENST00000562038 BNIP3LO60238 219 aa5.46□□□□□ -1.54
LINC01963-201ENST00000562038 H2AFYO75367 372 aaKnown RBP5.46□□□□□ -1.54
LINC01963-201ENST00000562038 CPNE6O95741 557 aa5.46□□□□□ -1.54
LINC01963-201ENST00000562038 CATP04040 527 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms