RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 CHRNA6Q15825 494 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 ANKRD20A4Q4UJ75 823 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 TTMPQ5BVD1 217 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 SIRPB2Q5JXA9 342 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 CACHD1Q5VU97 1274 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 CERS6Q6ZMG9 384 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 ZNF517Q6ZMY9 492 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-219ENST00000556951 USP45Q70EL2 814 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 NLRP9Q7RTR0 991 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 SYVN1Q86TM6 617 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 PPP1R3BQ86XI6 285 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 PPHLN1Q8NEY8 458 aaKnown RBP12.36□□□□□ -0.43
PSEN1-219ENST00000556951 FDCSPQ8NFU4 85 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 PNPLA2Q96AD5 504 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 SLC41A2Q96JW4 573 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 FCRL4Q96PJ5 515 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 TRIB3Q96RU7 358 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 ADGRE3Q9BY15 652 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 RMI1Q9H9A7 625 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 SLAMF7Q9NQ25 335 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 ACSS2Q9NR19 701 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 LGALS13Q9UHV8 139 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 PKDREJQ9NTG1 2253 aa12.36□□□□□ -0.43
PSEN1-219ENST00000556951 IGHV5-51A0A0C4DH38 117 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 FAM159BA6NKW6 160 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 POC1B-GALNT4F8VUJ3 575 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 GRID2O43424 1007 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 PYGLP06737 847 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 SLC2A4P14672 509 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 BRAFP15056 766 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 CD1EP15812 388 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 ZNF30P17039 623 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 AMD1P17707 334 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 ATP5DP30049 168 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 CHRNA4P43681 627 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 PPP1CAP62136 330 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 MSLNQ13421 630 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-219ENST00000556951 NAB1Q13506 487 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 KCNAB1Q14722 419 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 CRYMQ14894 314 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 ZRANB3Q5FWF4 1079 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 ZNF648Q5T619 568 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-219ENST00000556951 HENMT1Q5T8I9 393 aaKnown RBP12.35□□□□□ -0.43
PSEN1-219ENST00000556951 LCN10Q6JVE6 187 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 CNPY4Q8N129 248 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 SLC38A9Q8NBW4 561 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 TLCD1Q96CP7 247 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 BARD1Q99728 777 aaKnown RBP12.35□□□□□ -0.43
PSEN1-219ENST00000556951 DHRS4Q9BTZ2 278 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 TMUB1Q9BVT8 246 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 TDRD1Q9BXT4 1180 aaKnown RBP12.35□□□□□ -0.43
PSEN1-219ENST00000556951 RAB33BQ9H082 229 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 CHRAC1Q9NRG0 131 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 KLC4Q9NSK0 619 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 ATXN10Q9UBB4 475 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 TCAF1Q9Y4C2 921 aa12.35□□□□□ -0.43
PSEN1-219ENST00000556951 POLEQ07864 2286 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 PRSS44E7EML9 344 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 RASSF9O75901 435 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 C1QAP02745 245 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 CD99P14209 185 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 ZNF8P17098 575 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 ITGA3P26006 1051 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 VARSP26640 1264 aaKnown RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 GCAP28676 217 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 RPL26P61254 145 aaKnown RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 MGAT5Q09328 741 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 POU6F1Q14863 301 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 KBTBD12Q3ZCT8 623 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 TNFAIP8L3Q5GJ75 292 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 LGSNQ5TDP6 509 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 FAM69BQ5VUD6 431 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 ADGRD1Q6QNK2 874 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 FAM92BQ6ZTR7 304 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 SLC26A11Q86WA9 606 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 LRRC6Q86X45 466 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 RAVER1Q8IY67 606 aaKnown RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 CISD2Q8N5K1 135 aaKnown RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 AVL9Q8NBF6 648 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 SLC44A1Q8WWI5 657 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 CDKL2Q92772 493 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 ZNF669Q96BR6 464 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 SMAD5Q99717 465 aaKnown RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 TRIM56Q9BRZ2 755 aaKnown RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 SLC40A1Q9NP59 571 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 PSMC3IPQ9P2W1 217 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 NOVA2Q9UNW9 492 aaKnown RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 RPL26L1Q9UNX3 145 aaKnown RBP12.34□□□□□ -0.43
PSEN1-219ENST00000556951 CHKBQ9Y259 395 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 IKBKGQ9Y6K9 419 aa12.34□□□□□ -0.43
PSEN1-219ENST00000556951 ZCWPW2A0A1B0GU75 182 aa12.33□□□□□ -0.44
PSEN1-219ENST00000556951 MROH6A6NGR9 719 aa12.33□□□□□ -0.44
PSEN1-219ENST00000556951 CHUKO15111 745 aa12.33□□□□□ -0.44
PSEN1-219ENST00000556951 VIPP01282 170 aa12.33□□□□□ -0.44
PSEN1-219ENST00000556951 CAPN1P07384 714 aa12.33□□□□□ -0.44
PSEN1-219ENST00000556951 PAMP19021 973 aa12.33□□□□□ -0.44
PSEN1-219ENST00000556951 NMBRP28336 390 aa12.33□□□□□ -0.44
PSEN1-219ENST00000556951 CAPZBP47756 277 aa12.33□□□□□ -0.44
PSEN1-219ENST00000556951 SPINT3P49223 89 aa12.33□□□□□ -0.44
PSEN1-219ENST00000556951 ITGA1P56199 1179 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms