RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 SUPT3HB4E1H0 165 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 GOLGA8RI6L899 631 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 CDC7O00311 574 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 COPEO14579 308 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 KERAO60938 352 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 GLRA3O75311 464 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 SUPT3HO75486 399 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 CCNDBP1O95273 360 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 GUCA1CO95843 209 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 TPBGLP0DKB5 382 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 KRT4P19013 534 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 TAC1P20366 129 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 CD1CP29017 333 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 PKLRP30613 574 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 RPA3P35244 121 aaPredicted RBP7.4□□□□□ -1.22
TDP1-214ENST00000556063 CAPZBP47756 277 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 ID4P47928 161 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 CSRP3P50461 194 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 PGGT1BP53609 377 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 PNLIPRP1P54315 467 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 TRA2AQ13595 282 aaKnown RBP eCLIP7.4□□□□□ -1.22
TDP1-214ENST00000556063 TSTA3Q13630 321 aaPredicted RBP7.4□□□□□ -1.22
TDP1-214ENST00000556063 CYP2A13Q16696 494 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 PHKG1Q16816 387 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.4□□□□□ -1.22
TDP1-214ENST00000556063 THEMIS2Q5TEJ8 643 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 SULT1C3Q6IMI6 304 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 IRGCQ6NXR0 463 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 TMEM71Q6P5X7 295 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 SBSNQ6UWP8 590 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 ISCA2Q86U28 154 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 TRABD2AQ86V40 505 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 SRRM1Q8IYB3 904 aaKnown RBP7.4□□□□□ -1.22
TDP1-214ENST00000556063 CENPLQ8N0S6 344 aaPredicted RBP7.4□□□□□ -1.22
TDP1-214ENST00000556063 CARFQ8N187 725 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 GALNT15Q8N3T1 639 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 SPATA6LQ8N4H0 392 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 OR4D9Q8NGE8 314 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 HMGCLL1Q8TB92 370 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 FBXL8Q96CD0 374 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 PGM2Q96G03 612 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 DEPDC7Q96QD5 511 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 PKP4Q99569 1192 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 MRPL57Q9BQC6 102 aaKnown RBP7.4□□□□□ -1.22
TDP1-214ENST00000556063 STRADBQ9C0K7 418 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 MRPL46Q9H2W6 279 aaKnown RBP7.4□□□□□ -1.22
TDP1-214ENST00000556063 XKR8Q9H6D3 395 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 ALG9Q9H6U8 611 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 CNOT10Q9H9A5 744 aaKnown RBP7.4□□□□□ -1.22
TDP1-214ENST00000556063 IGSF5Q9NSI5 407 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 INTS7Q9NVH2 962 aaKnown RBP7.4□□□□□ -1.22
TDP1-214ENST00000556063 UTP6Q9NYH9 597 aaKnown RBP7.4□□□□□ -1.22
TDP1-214ENST00000556063 NUDT4Q9NZJ9 180 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 CD274Q9NZQ7 290 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 MID2Q9UJV3 735 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 ADAMTS6Q9UKP5 1117 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 GRID1Q9ULK0 1009 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 PLAGL1Q9UM63 463 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 ICKQ9UPZ9 632 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 PCDHB11Q9Y5F2 797 aa7.4□□□□□ -1.22
TDP1-214ENST00000556063 A0A1W2PPM1 405 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 A0A1W2PQM1 296 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 TLCD2A6NGC4 264 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 D6RAR5 112 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 NTN3O00634 580 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 GIPC1O14908 333 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 TOX3O15405 576 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 CAPN5O15484 640 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 SMIM24O75264 130 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 RASSF9O75901 435 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 IPO13O94829 963 aaKnown RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 DKK1O94907 266 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 SLC16A8O95907 504 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 MT-CO3P00414 261 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 CHRM5P08912 532 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 ERGP11308 486 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 GFAPP14136 432 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 JUPP14923 745 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 POLR2CP19387 275 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 CDH3P22223 829 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 OAS2P29728 719 aaKnown RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 CRHR1P34998 444 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 GLRBP48167 497 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 ARL4DP49703 201 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 INHBCP55103 352 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 ABATP80404 500 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 IRF9Q00978 393 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 SLC18A2Q05940 514 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 GRB7Q14451 532 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 TGFBIQ15582 683 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 SF1Q15637 639 aaKnown RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 CCDC153Q494R4 210 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 NKAIN2Q5VXU1 208 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 CAPN13Q6MZZ7 669 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 AGTRAPQ6RW13 159 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 DHRS13Q6UX07 377 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 RAB44Q7Z6P3 723 aaPredicted RBP7.39□□□□□ -1.23
TDP1-214ENST00000556063 CLEC14AQ86T13 490 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 SLCO6A1Q86UG4 719 aa7.39□□□□□ -1.23
TDP1-214ENST00000556063 TMPRSS12Q86WS5 348 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms