RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 S1PR4O95977 384 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 MAGP20916 626 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 CD9P21926 228 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 PTGIRP43119 386 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 CHAF1BQ13112 559 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 TYSND1Q2T9J0 566 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 CTSL3PQ5NE16 218 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 RNF187Q5TA31 235 aaPredicted RBP13.3□□□□□ -0.28
PCNX4-209ENST00000555569 FAM69BQ5VUD6 431 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 ANKRD22Q5VYY1 191 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 ARMC3Q5W041 872 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 CASC4Q6P4E1 433 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 TLDC1Q6P9B6 456 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 TAX1BP1Q86VP1 789 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 FAM20CQ8IXL6 584 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 TEX19Q8NA77 164 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 LPGAT1Q92604 370 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 MS4A14Q96JA4 679 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 BIRC8Q96P09 236 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 TCF12Q99081 682 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 NAP1L3Q99457 506 aaPredicted RBP13.3□□□□□ -0.28
PCNX4-209ENST00000555569 C17orf62Q9BQA9 187 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 DHRS4Q9BTZ2 278 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 RAB11FIP5Q9BXF6 653 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 ING2Q9H160 280 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 ACSS2Q9NR19 701 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 IRAK4Q9NWZ3 460 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 SLC39A10Q9ULF5 831 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 SRPK3Q9UPE1 567 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 PLCL2Q9UPR0 1127 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 PADI2Q9Y2J8 665 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 MRFAP1Q9Y605 127 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 NFS1Q9Y697 457 aa13.3□□□□□ -0.28
PCNX4-209ENST00000555569 UBR5O95071 2799 aaPredicted RBP13.29□□□□□ -0.28
PCNX4-209ENST00000555569 H3BMM5 538 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 AVILO75366 819 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 TMEM63AO94886 807 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 C1orf105O95561 183 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 CTSBP07858 339 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 CBSLP0DN79 551 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 PAMP19021 973 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 OGNP20774 298 aaKnown RBP13.29□□□□□ -0.28
PCNX4-209ENST00000555569 FMO4P31512 558 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 CBSP35520 551 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 COILP38432 576 aaPredicted RBP13.29□□□□□ -0.28
PCNX4-209ENST00000555569 BDKRB1P46663 353 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 CCL11P51671 97 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 CYP1B1Q16678 543 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 COLEC12Q5KU26 742 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 C1orf189Q5VU69 101 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 RHBDD2Q6NTF9 364 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 FIGLAQ6QHK4 219 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 CAND1Q86VP6 1230 aaKnown RBP13.29□□□□□ -0.28
PCNX4-209ENST00000555569 ZNF655Q8N720 491 aaPredicted RBP13.29□□□□□ -0.28
PCNX4-209ENST00000555569 MCUQ8NE86 351 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 PROKR1Q8TCW9 393 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 SKA2Q8WVK7 121 aaPredicted RBP13.29□□□□□ -0.28
PCNX4-209ENST00000555569 RAD51AP1Q96B01 352 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 FOPNLQ96NB1 174 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 TXLNGQ9NUQ3 528 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 INTS7Q9NVH2 962 aaKnown RBP13.29□□□□□ -0.28
PCNX4-209ENST00000555569 EURLQ9NYK6 297 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 SAMD15Q9P1V8 674 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.29□□□□□ -0.28
PCNX4-209ENST00000555569 GPN3Q9UHW5 284 aaPredicted RBP13.29□□□□□ -0.28
PCNX4-209ENST00000555569 KLHL20Q9Y2M5 609 aa13.29□□□□□ -0.28
PCNX4-209ENST00000555569 FAM237BA0A1B0GVD1 139 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 PGRMC1O00264 195 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 NIPSNAP2O75323 286 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 FKBP9O95302 570 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 ESR1P03372 595 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 PDGFAP04085 211 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 MLNP12872 115 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 CCNFP41002 786 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 ADARP55265 1226 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 DCDP81605 110 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 SF1Q15637 639 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 ANKRD20A4Q4UJ75 823 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 MLIPQ5VWP3 458 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 NEPROQ6NW34 567 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 CCDC137Q6PK04 289 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 RAB43Q86YS6 212 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 MCATQ8IVS2 390 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 RAB42Q8N4Z0 105 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 ZBTB2Q8N680 514 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 ZNF669Q96BR6 464 aaPredicted RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 GBP5Q96PP8 586 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 NDC1Q9BTX1 674 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 SLC25A23Q9BV35 468 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 XAB2Q9HCS7 855 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 DHCR7Q9UBM7 475 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 NDOR1Q9UHB4 597 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 RUVBL2Q9Y230 463 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 CRYL1Q9Y2S2 319 aa13.28□□□□□ -0.28
PCNX4-209ENST00000555569 PCDHGA9Q9Y5G4 932 aaKnown RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 RP1L1Q8IWN7 2480 aaPredicted RBP13.28□□□□□ -0.28
PCNX4-209ENST00000555569 HEATR5BQ9P2D3 2071 aa13.27□□□□□ -0.28
PCNX4-209ENST00000555569 MAGEB16A2A368 324 aa13.27□□□□□ -0.29
PCNX4-209ENST00000555569 SDR42E2A6NKP2 422 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms