RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CHMP1BQ7LBR1 199 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 BNIPLQ7Z465 357 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 VN1R5Q7Z5H4 357 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 IFNL1Q8IU54 200 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 ZDHHC13Q8IUH4 622 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 LSMEM1Q8N8F7 131 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 OR13J1Q8NGT2 312 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 RORBQ92753 470 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 OMA1Q96E52 524 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 TMEM74Q96NL1 305 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 TMEM246Q9BRR3 403 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 FEM1AQ9BSK4 669 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.13□□□□□ -1.59
PROM1-220ENST00000540805 RNF39Q9H2S5 420 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 SDR39U1Q9NRG7 319 aaPredicted RBP5.13□□□□□ -1.59
PROM1-220ENST00000540805 PIGVQ9NUD9 493 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 TMLHEQ9NVH6 421 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 FAM118AQ9NWS6 357 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 POLHQ9Y253 713 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 DNAJC15Q9Y5T4 150 aa5.13□□□□□ -1.59
PROM1-220ENST00000540805 MYLKQ15746 1914 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 FNDC1Q4ZHG4 1894 aaPredicted RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 ISPDA4D126 451 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 CCDC154A6NI56 674 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 PTGES3LE9PB15 166 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 H3BMM5 538 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 M0QX08 132 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 ENPP3O14638 875 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 RGS13O14921 159 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 PARNO95453 639 aaKnown RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 RAP2AP10114 183 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 TCF3P15923 654 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 AGXTP21549 392 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 PCMT1P22061 227 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 MAT2AP31153 395 aaKnown RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 ADRA1BP35368 520 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 AFF1P51825 1210 aaKnown RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 AIF1P55008 147 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 SLC9A5Q14940 896 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 DPY19L1Q2PZI1 675 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 FAM205BPQ63HN1 556 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 ZCCHC8Q6NZY4 707 aaKnown RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 P2RY8Q86VZ1 359 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 LACC1Q8IV20 430 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 RIMKLAQ8IXN7 391 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 SLAIN1Q8ND83 568 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 SPATA22Q8NHS9 363 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 ITFG1Q8TB96 612 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 VPS33AQ96AX1 596 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 CYP2S1Q96SQ9 504 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 NTN4Q9HB63 628 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 CFAP97Q9P2B7 532 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 POLG2Q9UHN1 485 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 USP22Q9UPT9 525 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 TESMINQ9Y4I5 508 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 COL4A6Q14031 1691 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 G3V2T6 193 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 UPK1AO00322 258 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 PIRO00625 290 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 KMOO15229 486 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 TBX1O43435 398 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 DYRK3O43781 588 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 IDH3BO43837 385 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 VPS4BO75351 444 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 EEDO75530 441 aaKnown RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 RFPL2O75678 378 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 TSPAN9O75954 239 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 CDK14O94921 469 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 CPSF4O95639 269 aaKnown RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 IGSF6O95976 241 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 MT-CYBP00156 380 aaPredicted RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 ANXA6P08133 673 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 SLC10A3P09131 477 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 CLEC2LP0C7M8 214 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 PPM1AP35813 382 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 MTHFRP42898 656 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 PPP5CP53041 499 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 OR4D2P58180 307 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 VBP1P61758 197 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 SNRPD2P62316 118 aaKnown RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 HERVK_113P63132 956 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 SH3BP2P78314 561 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 PURAQ00577 322 aaKnown RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 COL9A2Q14055 689 aaPredicted RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 DMC1Q14565 340 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 CTU2Q2VPK5 515 aaKnown RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 ADPRMQ3LIE5 342 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 CYP27C1Q4G0S4 372 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 PAGE3Q5JUK9 113 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 ARMC12Q5T9G4 340 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 HECTD2Q5U5R9 776 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 KIAA0319Q5VV43 1072 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 DESI1Q6ICB0 168 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 GDF6Q6KF10 455 aaPredicted RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 TIGD7Q6NT04 549 aaPredicted RBP5.12□□□□□ -1.59
PROM1-220ENST00000540805 LINGO4Q6UY18 593 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 PHYKPLQ8IUZ5 450 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 PLD3Q8IV08 490 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 NLGN4XQ8N0W4 816 aa5.12□□□□□ -1.59
PROM1-220ENST00000540805 CAMKK1Q8N5S9 505 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms