RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ZNF789	Q5FWF6	425 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	STEAP4	Q687X5	459 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	NAPRT	Q6XQN6	538 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	DENND6A	Q8IWF6	608 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	LINC01555	Q8NAE3	123 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GALNT6	Q8NCL4	622 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SPATA4	Q8NEY3	305 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	INPP5D	Q92835	1189 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	MED8	Q96G25	268 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	XKR8	Q9H6D3	395 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	WHRN	Q9P202	907 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SLC39A10	Q9ULF5	831 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	MED16	Q9Y2X0	877 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TEX264	Q9Y6I9	313 aa		11.88	□□□□□ -0.51
CLTCL1-205	ENST00000538828	EFCAB8	A8MWE9	144 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828		E7EQ34	232 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828		H3BMH7	237 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GFY	I3L273	518 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	MYO1C	O00159	1063 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TP73	O15350	636 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	EIF3H	O15372	352 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TTI1	O43156	1089 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TIAF1	O95411	115 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CAT	P04040	527 aa	Known RBP	11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	OAS2	P29728	719 aa	Known RBP	11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CASQ1	P31415	396 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	RORA	P35398	523 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TERF1	P54274	439 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CSE1L	P55060	971 aa	Known RBP	11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	RELA	Q04206	551 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SRSF6	Q13247	344 aa	Known RBP	11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CTBP1	Q13363	440 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	HSP90AA5P	Q58FG0	334 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	YOD1	Q5VVQ6	348 aa	Predicted RBP	11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TLDC1	Q6P9B6	456 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CDHR3	Q6ZTQ4	885 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CYS1	Q717R9	158 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TMEM126B	Q8IUX1	230 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	KLHL7	Q8IXQ5	586 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GPR135	Q8IZ08	494 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	DNAJC22	Q8N4W6	341 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	LMNTD1	Q8N9Z9	388 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	OR9A1P	Q8NGU1	263 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PROKR1	Q8TCW9	393 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ASB11	Q8WXH4	323 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	STARD8	Q92502	1023 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CERS2	Q96G23	380 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PPM1M	Q96MI6	270 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ERP44	Q9BS26	406 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	AARSD1	Q9BTE6	412 aa	Known RBP	11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	DHRS4	Q9BTZ2	278 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SPHK1	Q9NYA1	384 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ANKMY1	Q9P2S6	941 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SRPK3	Q9UPE1	567 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PLCL2	Q9UPR0	1127 aa		11.87	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ISM1	B1AKI9	464 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TMEM150C	B9EJG8	249 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	VPS26A	O75436	327 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TCN2	P20062	427 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CYP2A7	P20853	494 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	PEBP1	P30086	187 aa	Known RBP	11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	DLST	P36957	453 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	RGS4	P49798	205 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ITGA8	P53708	1063 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	RPS15	P62841	145 aa	Known RBP	11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CAV1	Q03135	178 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CDC20	Q12834	499 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	DNASE1L3	Q13609	305 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GPR19	Q15760	415 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	KLHL38	Q2WGJ6	581 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	LINC00303	Q3SY05	128 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	BBS9	Q3SYG4	887 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	MSS51	Q4VC12	460 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	RHBDD2	Q6NTF9	364 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZNF549	Q6P9A3	640 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	BORA	Q6PGQ7	559 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SYVN1	Q86TM6	617 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	DSEL	Q8IZU8	1212 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	OR1L3	Q8NH93	324 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CFAP61	Q8NHU2	1237 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CD200R1	Q8TD46	325 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZNF285	Q96NJ3	590 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TRIM56	Q9BRZ2	755 aa	Known RBP	11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	NSMCE4A	Q9NXX6	385 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	TAS2R13	Q9NYV9	303 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CROT	Q9UKG9	612 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	RALY	Q9UKM9	306 aa	Known RBP	11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	NFS1	Q9Y697	457 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	HEATR5B	Q9P2D3	2071 aa		11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SMG1	Q96Q15	3661 aa	Known RBP	11.86	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ANKRD12	Q6UB98	2062 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	MEN1	O00255	615 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SLC16A5	O15375	505 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	ZBTB14	O43829	449 aa		11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	SRPX2	O60687	465 aa	Predicted RBP	11.85	□□□□□ -0.51
CLTCL1-205	ENST00000538828	CREG1	O75629	220 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms