RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 AKR1A1P14550 325 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 MAGP20916 626 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 TWF1Q12792 350 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 CLCA4Q14CN2 919 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 C5orf22Q49AR2 442 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 RNF219Q5W0B1 726 aaPredicted RBP13.75□□□□□ -0.21
CLPB-209ENST00000538039 OR7A2PQ8NGA2 310 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 SLIRPQ9GZT3 109 aaKnown RBP13.75□□□□□ -0.21
CLPB-209ENST00000538039 RNF38Q9H0F5 515 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 DUSP21Q9H596 190 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 TMEM184CQ9NVA4 438 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 COMMD10Q9Y6G5 202 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 MANBAO00462 879 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 ZNF682O95780 498 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 OTCP00480 354 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 IRF1P10914 325 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 RPL17P18621 184 aaKnown RBP13.75□□□□□ -0.21
CLPB-209ENST00000538039 RYKP34925 604 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 HOXD12P35452 270 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 TGFBR2P37173 567 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 PTGER3P43115 390 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 CRYBA2P53672 197 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 CRISP3P54108 245 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 GTF2H3Q13889 308 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 ZNF846Q147U1 533 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 KCNA10Q16322 511 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 ZDHHC21Q8IVQ6 265 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 PIK3C3Q8NEB9 887 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 OR6Q1Q8NGQ2 317 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 PYURFQ96I23 114 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 UROC1Q96N76 676 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 CDH23Q9H251 3354 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 LRTM1Q9HBL6 345 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 POU2F3Q9UKI9 436 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 ZNF232Q9UNY5 417 aa13.75□□□□□ -0.21
CLPB-209ENST00000538039 C16orf96A6NNT2 1141 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 WBP4O75554 376 aaKnown RBP13.74□□□□□ -0.21
CLPB-209ENST00000538039 ESR1P03372 595 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 SPNP16150 400 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 IGFBP5P24593 272 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 GRK5P34947 590 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 RING1Q06587 406 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 DOC2BQ14184 412 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 TRIM71Q2Q1W2 868 aaKnown RBP13.74□□□□□ -0.21
CLPB-209ENST00000538039 DOK6Q6PKX4 331 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 PRSS55Q6UWB4 352 aaPredicted RBP13.74□□□□□ -0.21
CLPB-209ENST00000538039 RFLNAQ6ZTI6 216 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 UTS2BQ765I0 119 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 SLC7A5P1Q8MH63 180 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 EID3Q8N140 333 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 SVOPLQ8N434 492 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 APH1BQ8WW43 257 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 VMP1Q96GC9 406 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 EGFL8Q99944 293 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 CD244Q9BZW8 370 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 AMBNQ9NP70 447 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 QPCTLQ9NXS2 382 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 LHX3Q9UBR4 397 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 ZNF451Q9Y4E5 1061 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 SNX5Q9Y5X3 404 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 PDE4DIPQ5VU43 2346 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 XIRP2A4UGR9 3374 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 HTR3EA5X5Y0 456 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 ULK1O75385 1050 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 PSMB9P28065 219 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 AKT1P31749 480 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 KRT20P35900 424 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 GNPDA1P46926 289 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 MRPL58Q14197 206 aaKnown RBP13.74□□□□□ -0.21
CLPB-209ENST00000538039 NFE2Q16621 373 aaPredicted RBP13.74□□□□□ -0.21
CLPB-209ENST00000538039 SYT16Q17RD7 645 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 SLC22A16Q86VW1 577 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
CLPB-209ENST00000538039 TRIB2Q92519 343 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 MAGED4Q96JG8 741 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 RDH12Q96NR8 316 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 TM6SF2Q9BZW4 377 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 ZBTB20Q9HC78 741 aaPredicted RBP13.74□□□□□ -0.21
CLPB-209ENST00000538039 C1orf109Q9NX04 203 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 C3orf18Q9UK00 162 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 SLC6A14Q9UN76 642 aa13.74□□□□□ -0.21
CLPB-209ENST00000538039 FRMPD3Q5JV73 1810 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 MYO1GB0I1T2 1018 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 M0QX08 132 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 SMAD6O43541 496 aaKnown RBP13.73□□□□□ -0.21
CLPB-209ENST00000538039 PCDHGA12O60330 932 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 SCELO95171 688 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 GSTT2P0CG29 244 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 GSTT2BP0CG30 244 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 CD9P21926 228 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 CREMQ03060 361 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 SELENBP1Q13228 472 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 NCEH1Q6PIU2 408 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 PAGE2Q7Z2X7 111 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 TRIM46Q7Z4K8 759 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 Q8N9G6 341 aaPredicted RBP13.73□□□□□ -0.21
CLPB-209ENST00000538039 APIPQ96GX9 242 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 PDLIM5Q96HC4 596 aaKnown RBP13.73□□□□□ -0.21
CLPB-209ENST00000538039 PPP3R2Q96LZ3 170 aa13.73□□□□□ -0.21
CLPB-209ENST00000538039 YIPF2Q9BWQ6 316 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms