RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 CUL1Q13616 776 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 ERV3-1Q14264 604 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 KIR2DS3Q14952 304 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 KLHL38Q2WGJ6 581 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.76□□□□□ -0.21
UBE3B-206ENST00000536398 HIBCHQ6NVY1 386 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-206ENST00000536398 SYDE1Q6ZW31 735 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-206ENST00000536398 KCNMB4Q86W47 210 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 OR2L8Q8NGY9 312 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 OR8K5Q8NH50 307 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 ARHGAP9Q9BRR9 750 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 EFHD1Q9BUP0 239 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 CHST8Q9H2A9 424 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 FANCEQ9HB96 536 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 LATS2Q9NRM7 1088 aa13.76□□□□□ -0.21
UBE3B-206ENST00000536398 ARHGEF33A8MVX0 844 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 E5RI56 91 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 H3BMH7 237 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 MEN1O00255 615 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 PRICKLE3O43900 615 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-206ENST00000536398 PSMB5P28074 263 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 ELK3P41970 407 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 ITGA1P56199 1179 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 YBX1P67809 324 aaKnown RBP13.75□□□□□ -0.21
UBE3B-206ENST00000536398 TIAL1Q01085 375 aaKnown RBP eCLIP13.75□□□□□ -0.21
UBE3B-206ENST00000536398 FASTKQ14296 549 aaKnown RBP13.75□□□□□ -0.21
UBE3B-206ENST00000536398 MORF4L2Q15014 288 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 SLC5A12Q1EHB4 618 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 DEFB109BQ30KR1 87 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 FAM69BQ5VUD6 431 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 BORAQ6PGQ7 559 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 SYT10Q6XYQ8 523 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 DNAJC22Q8N4W6 341 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 MR1Q95460 341 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 RAD51AP1Q96B01 352 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 CLIP3Q96DZ5 547 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 CFAP36Q96G28 342 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 TCTN2Q96GX1 697 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 RUNDC3BQ96NL0 473 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 NDNQ99608 321 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 GPR21Q99679 349 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 PCMTD2Q9NV79 361 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 SERTAD3Q9UJW9 196 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 SLC39A10Q9ULF5 831 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 CHMP2BQ9UQN3 213 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 VPS9D1Q9Y2B5 631 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 SNX24Q9Y343 169 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 PCDHB3Q9Y5E6 796 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 BOD1L1Q8NFC6 3051 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 PIEZO2Q9H5I5 2752 aa13.75□□□□□ -0.21
UBE3B-206ENST00000536398 CCDC188H7C350 402 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 MAP3K7O43318 606 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 ZNF749O43361 778 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 KDM1AO60341 852 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 CREG1O75629 220 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 MSL3P1P0C860 447 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 CYP2A7P20853 494 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 MAGP20916 626 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 RORAP35398 523 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 GRIA3P42263 894 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 RPL21P46778 160 aaKnown RBP13.74□□□□□ -0.21
UBE3B-206ENST00000536398 CARSP49589 748 aaKnown RBP13.74□□□□□ -0.21
UBE3B-206ENST00000536398 PGGT1BP53609 377 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 C2orf54Q08AI8 447 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 C19orf57Q0VDD7 668 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 PTCHD3Q3KNS1 767 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 SPANXN3Q5MJ09 141 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 FCRL6Q6DN72 434 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 TTC23LQ6PF05 361 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 TRMT10BQ6PF06 316 aaKnown RBP13.74□□□□□ -0.21
UBE3B-206ENST00000536398 CYHR1Q6ZMK1 362 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 ZNF517Q6ZMY9 492 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-206ENST00000536398 ANKMY2Q8IV38 441 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 DSELQ8IZU8 1212 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 C2CD4AQ8NCU7 369 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-206ENST00000536398 CALML6Q8TD86 181 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 MED8Q96G25 268 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 FOPNLQ96NB1 174 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 AARSD1Q9BTE6 412 aaKnown RBP13.74□□□□□ -0.21
UBE3B-206ENST00000536398 ACTL8Q9H568 366 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 ACTR5Q9H9F9 607 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-206ENST00000536398 SYTL2Q9HCH5 934 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-206ENST00000536398 PCDHGA6Q9Y5G7 932 aa13.74□□□□□ -0.21
UBE3B-206ENST00000536398 A0A1W2PPV9 198 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 CDC14CA4D256 554 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 E7EQ34 232 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 NRP2O60462 931 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 PSIP1O75475 530 aaKnown RBP13.73□□□□□ -0.21
UBE3B-206ENST00000536398 OR2B3O76000 313 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 SEC31AO94979 1220 aaKnown RBP13.73□□□□□ -0.21
UBE3B-206ENST00000536398 AHSGP02765 367 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 CAPN1P07384 714 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 ATP5DP30049 168 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 CASQ1P31415 396 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 POLE2P56282 527 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 NFKB2Q00653 900 aa13.73□□□□□ -0.21
UBE3B-206ENST00000536398 SF1Q15637 639 aaKnown RBP13.73□□□□□ -0.21
UBE3B-206ENST00000536398 RBM20Q5T481 1227 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms