RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 TBC1D3IA0A087WXS9 549 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TBC1D3EA0A087X179 549 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TBC1D3KA0A087X1G2 549 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TBC1D3FA6NER0 549 aaPredicted RBP10.6□□□□□ -0.71
SRPRA-205ENST00000531104 CHURC1-FNTBB4DL54 471 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TBC1D3LB9A6J9 549 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 MAN2B1O00754 1011 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 NRP2O60462 931 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 PDYNP01213 254 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TBC1D3HP0C7X1 549 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 CHRNB1P11230 501 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 CD22P20273 847 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 ITPKAP23677 461 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 CCND1P24385 295 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 DPP6P42658 865 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TPMTP51580 245 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 NAE1Q13564 534 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 KPNB1Q14974 876 aaKnown RBP10.6□□□□□ -0.71
SRPRA-205ENST00000531104 KIAA0040Q15053 153 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 MLF2Q15773 248 aaPredicted RBP10.6□□□□□ -0.71
SRPRA-205ENST00000531104 CCDC85BQ15834 202 aaPredicted RBP10.6□□□□□ -0.71
SRPRA-205ENST00000531104 KIF19Q2TAC6 998 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TRMT5Q32P41 509 aaKnown RBP10.6□□□□□ -0.71
SRPRA-205ENST00000531104 PLA2G4EQ3MJ16 856 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 PYCR3Q53H96 274 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TBC1D3GQ6DHY5 549 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TBC1D3CQ6IPX1 549 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 GRHL2Q6ISB3 625 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 DOK6Q6PKX4 331 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 RETREG3Q86VR2 466 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 ZFAND4Q86XD8 727 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 RGL4Q8IZJ4 473 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TBC1D3Q8IZP1 549 aaPredicted RBP10.6□□□□□ -0.71
SRPRA-205ENST00000531104 ENDOVQ8N8Q3 282 aaKnown RBP10.6□□□□□ -0.71
SRPRA-205ENST00000531104 OR2T34Q8NGX1 318 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 WDR20Q8TBZ3 569 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 HLA-CQ95604 372 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 LRCH3Q96II8 777 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 FCRL1Q96LA6 429 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 NPAS2Q99743 824 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 MRPL1Q9BYD6 325 aaKnown RBP10.6□□□□□ -0.71
SRPRA-205ENST00000531104 BTBD1Q9H0C5 482 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TM7SF3Q9NS93 570 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 FARSBQ9NSD9 589 aaKnown RBP10.6□□□□□ -0.71
SRPRA-205ENST00000531104 MAP10Q9P2G4 905 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 EBF1Q9UH73 591 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 BAIAP2L1Q9UHR4 511 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 ACSL5Q9ULC5 683 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 ZNF490Q9ULM2 529 aaPredicted RBP10.6□□□□□ -0.71
SRPRA-205ENST00000531104 SNX6Q9UNH7 406 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 DUSP12Q9UNI6 340 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 NDUFAF1Q9Y375 327 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 PRKAB1Q9Y478 270 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 PCDHGA7Q9Y5G6 932 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TRPM6Q9BX84 2022 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 CDH23Q9H251 3354 aa10.6□□□□□ -0.71
SRPRA-205ENST00000531104 TCRBV21S2A2A0A5A6 115 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 FAM234BA2RU67 622 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 E7ENX8 843 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 H0YIV9 168 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 FFAR3O14843 346 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 GPR42O15529 346 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 LATO43561 262 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 ENTPD5O75356 428 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 RSL1D1O76021 490 aaKnown RBP10.59□□□□□ -0.71
SRPRA-205ENST00000531104 ACADMP11310 421 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 ACPPP15309 386 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 PCSK2P16519 638 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 NPPBP16860 134 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 CAPN3P20807 821 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 KELP23276 732 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 IL12AP29459 219 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 ARL1P40616 181 aaPredicted RBP10.59□□□□□ -0.71
SRPRA-205ENST00000531104 HNF4AP41235 474 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 GNPDA1P46926 289 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 NUBP1P53384 320 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 ACTR3P61158 418 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 TAP2Q03519 686 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 CHIT1Q13231 466 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 MAD2L1Q13257 205 aaPredicted RBP10.59□□□□□ -0.71
SRPRA-205ENST00000531104 ART3Q13508 389 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 RCAN2Q14206 197 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 ARHGAP19Q14CB8 494 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 NR6A1Q15406 480 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 ZRSR2Q15696 482 aaKnown RBP10.59□□□□□ -0.71
SRPRA-205ENST00000531104 CPSF6Q16630 551 aaKnown RBP eCLIP10.59□□□□□ -0.71
SRPRA-205ENST00000531104 ZNF423Q2M1K9 1284 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 AP5B1Q2VPB7 878 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 RFTN2Q52LD8 501 aaPredicted RBP10.59□□□□□ -0.71
SRPRA-205ENST00000531104 PIGGQ5H8A4 983 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 SLCO4C1Q6ZQN7 724 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 DCUN1D3Q8IWE4 304 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 SYNPOQ8N3V7 929 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 FNDC5Q8NAU1 212 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 PROKR1Q8TCW9 393 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 SETD7Q8WTS6 366 aaKnown RBP10.59□□□□□ -0.71
SRPRA-205ENST00000531104 ROPN1LQ96C74 230 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 TEX37Q96LM6 180 aa10.59□□□□□ -0.71
SRPRA-205ENST00000531104 CDX2Q99626 313 aaPredicted RBP10.59□□□□□ -0.71
SRPRA-205ENST00000531104 GPATCH1Q9BRR8 931 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms