RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 ZIC1Q15915 447 aa17.09■□□□□ 0.33
CMTM1-213ENST00000529506 RNF187Q5TA31 235 aaPredicted RBP17.09■□□□□ 0.33
CMTM1-213ENST00000529506 ZNF385CQ66K41 422 aaPredicted RBP17.09■□□□□ 0.33
CMTM1-213ENST00000529506 FAM198BQ6UWH4 519 aa17.09■□□□□ 0.33
CMTM1-213ENST00000529506 OTUD6BQ8N6M0 293 aa17.09■□□□□ 0.33
CMTM1-213ENST00000529506 FLVCR1-AS1Q8TAF5 88 aa17.09■□□□□ 0.33
CMTM1-213ENST00000529506 NACC2Q96BF6 587 aa17.09■□□□□ 0.33
CMTM1-213ENST00000529506 PTERQ96BW5 349 aa17.09■□□□□ 0.33
CMTM1-213ENST00000529506 EURLQ9NYK6 297 aa17.09■□□□□ 0.33
CMTM1-213ENST00000529506 PLAGL1Q9UM63 463 aa17.09■□□□□ 0.33
CMTM1-213ENST00000529506 VPS9D1Q9Y2B5 631 aa17.09■□□□□ 0.33
CMTM1-213ENST00000529506 ANKRD12Q6UB98 2062 aa17.09■□□□□ 0.33
CMTM1-213ENST00000529506 UBR5O95071 2799 aaPredicted RBP17.09■□□□□ 0.33
CMTM1-213ENST00000529506 IQCF5A8MTL0 148 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 TARM1B6A8C7 271 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 H3BMH7 237 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 RASGRF2O14827 1237 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 CEACAM4O75871 244 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 VAPBO95292 243 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 PAMP19021 973 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 FOLR3P41439 243 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 KCNJ1P48048 391 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 CD97P48960 835 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 UBAP2LQ14157 1087 aaKnown RBP17.08■□□□□ 0.32
CMTM1-213ENST00000529506 TCTE1Q5JU00 501 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 YOD1Q5VVQ6 348 aaPredicted RBP17.08■□□□□ 0.32
CMTM1-213ENST00000529506 LDB1Q86U70 411 aaPredicted RBP17.08■□□□□ 0.32
CMTM1-213ENST00000529506 VRK3Q8IV63 474 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 MCATQ8IVS2 390 aaKnown RBP17.08■□□□□ 0.32
CMTM1-213ENST00000529506 KRT222Q8N1A0 295 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 ZBTB2Q8N680 514 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 ZNF655Q8N720 491 aaPredicted RBP17.08■□□□□ 0.32
CMTM1-213ENST00000529506 SKA2Q8WVK7 121 aaPredicted RBP17.08■□□□□ 0.32
CMTM1-213ENST00000529506 MIB2Q96AX9 1013 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 GBP5Q96PP8 586 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 P2RY12Q9H244 342 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 IL1RAPL1Q9NZN1 696 aa17.08■□□□□ 0.32
CMTM1-213ENST00000529506 TTC7AQ9ULT0 858 aaPredicted RBP17.08■□□□□ 0.32
CMTM1-213ENST00000529506 ZNF185O15231 689 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 VPS4BO75351 444 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 CBSLP0DN79 551 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 ALAS2P22557 587 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 NMBRP28336 390 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 CBSP35520 551 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 CRADDP78560 199 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 CHAF1BQ13112 559 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 NAA25Q14CX7 972 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 FAM214AQ32MH5 1076 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 NKAIN1Q4KMZ8 207 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 COLEC12Q5KU26 742 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 CPZQ66K79 652 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 FIGLAQ6QHK4 219 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 OR2Y1Q8NGV0 311 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 NAP1L3Q99457 506 aaPredicted RBP17.07■□□□□ 0.32
CMTM1-213ENST00000529506 GPR83Q9NYM4 423 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 C5AR2Q9P296 337 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 MARCH4Q9P2E8 410 aaPredicted RBP17.07■□□□□ 0.32
CMTM1-213ENST00000529506 VPS4AQ9UN37 437 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 SOX13Q9UN79 622 aa17.07■□□□□ 0.32
CMTM1-213ENST00000529506 PTRH2Q9Y3E5 179 aaKnown RBP17.07■□□□□ 0.32
CMTM1-213ENST00000529506 SNRNP200O75643 2136 aaKnown RBP17.06■□□□□ 0.32
CMTM1-213ENST00000529506 PCM1Q15154 2024 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.06■□□□□ 0.32
CMTM1-213ENST00000529506 SRPX2O60687 465 aaPredicted RBP17.06■□□□□ 0.32
CMTM1-213ENST00000529506 KLF7O75840 302 aaPredicted RBP17.06■□□□□ 0.32
CMTM1-213ENST00000529506 ESR1P03372 595 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 MAGP20916 626 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 MGAT1P26572 445 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 OTX2P32243 289 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 MLLT10P55197 1068 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 ADARP55265 1226 aaKnown RBP17.06■□□□□ 0.32
CMTM1-213ENST00000529506 EIF3BP55884 814 aaKnown RBP17.06■□□□□ 0.32
CMTM1-213ENST00000529506 GRM7Q14831 915 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 DEFB110Q30KQ9 67 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 C1orf189Q5VU69 101 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 LINC01555Q8NAE3 123 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 CLEC1AQ8NC01 280 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 VPS50Q96JG6 964 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 PBKQ96KB5 322 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 MENTQ9BUN1 341 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 SAMD15Q9P1V8 674 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 DHCR7Q9UBM7 475 aaKnown RBP17.06■□□□□ 0.32
CMTM1-213ENST00000529506 PLAAQ9Y263 795 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 CCDC88CQ9P219 2028 aa17.06■□□□□ 0.32
CMTM1-213ENST00000529506 HECTD1Q9ULT8 2610 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 C1orf105O95561 183 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 ALBP02768 609 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 PDGFAP04085 211 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 CHRM3P20309 590 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 PEBP1P30086 187 aaKnown RBP17.05■□□□□ 0.32
CMTM1-213ENST00000529506 FMO4P31512 558 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 GPS1Q13098 491 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 GRB7Q14451 532 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 KIAA0930Q6ICG6 404 aaPredicted RBP17.05■□□□□ 0.32
CMTM1-213ENST00000529506 C2orf73Q8N5S3 287 aaPredicted RBP17.05■□□□□ 0.32
CMTM1-213ENST00000529506 LMNTD1Q8N9Z9 388 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 TTC29Q8NA56 475 aaPredicted RBP17.05■□□□□ 0.32
CMTM1-213ENST00000529506 FDCSPQ8NFU4 85 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 HMGCLL1Q8TB92 370 aa17.05■□□□□ 0.32
CMTM1-213ENST00000529506 CPT1CQ8TCG5 803 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms