RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 PKLRP30613 574 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 CCNFP41002 786 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 RPS18P62269 152 aaKnown RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 NFKB2Q00653 900 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 DR1Q01658 176 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 KCNAB2Q13303 367 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 CTBP1Q13363 440 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 CUL1Q13616 776 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 PTK6Q13882 451 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 SLC9A5Q14940 896 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 PTCHD3Q3KNS1 767 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 CTSL3PQ5NE16 218 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 HP1BP3Q5SSJ5 553 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 PRAMEF17Q5VTA0 474 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 XKR5Q6UX68 686 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 KCNMB4Q86W47 210 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 FAM20CQ8IXL6 584 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 SYTL1Q8IYJ3 562 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ADGRF3Q8IZF5 1079 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ZNF843Q8N446 348 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ZNF655Q8N720 491 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 TTC29Q8NA56 475 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 MCUQ8NE86 351 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 OR1L3Q8NH93 324 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 C9orf43Q8TAL5 461 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 SNRNP27Q8WVK2 155 aaKnown RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 SEC14L1Q92503 715 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ALKBH8Q96BT7 664 aaKnown RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ZNF501Q96CX3 271 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 TRIM44Q96DX7 344 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 TCTN2Q96GX1 697 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 TCF12Q99081 682 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 TRIM56Q9BRZ2 755 aaKnown RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 NDC1Q9BTX1 674 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 CHST8Q9H2A9 424 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ACTL8Q9H568 366 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ZNF71Q9NQZ8 489 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ACSS2Q9NR19 701 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 FAM114A2Q9NRY5 505 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 INTS10Q9NVR2 710 aaKnown RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 SPHK1Q9NYA1 384 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 TRMT6Q9UJA5 497 aaKnown RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 FARSAQ9Y285 508 aaKnown RBP8.77□□□□□ -1.01
CMTM1-210ENST00000528441 KLHL20Q9Y2M5 609 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 NFS1Q9Y697 457 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 FAM169AQ9Y6X4 670 aa8.77□□□□□ -1.01
CMTM1-210ENST00000528441 ARGFXA6NJG6 315 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 ZNF839A8K0R7 811 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 B8ZZF3 427 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 MKRN2OSH3BPM6 223 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 MEN1O00255 615 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 RASGRF2O14827 1237 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 ZSCAN9O15535 394 aaPredicted RBP8.76□□□□□ -1.01
CMTM1-210ENST00000528441 ZNF749O43361 778 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 S1PR4O95977 384 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 EIF2S1P05198 315 aaKnown RBP8.76□□□□□ -1.01
CMTM1-210ENST00000528441 UQCRHP07919 91 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 PGAM1P18669 254 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 SAT1P21673 171 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 CD9P21926 228 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 F8A1P23610 371 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 PSMA3P25788 255 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 PTPN4P29074 926 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 CMPK1P30085 196 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 CASQ1P31415 396 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 OTX2P32243 289 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 RPA3P35244 121 aaPredicted RBP8.76□□□□□ -1.01
CMTM1-210ENST00000528441 SLC1A2P43004 574 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 RGS4P49798 205 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 MPP1Q00013 466 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 DHX9Q08211 1270 aaKnown RBP8.76□□□□□ -1.01
CMTM1-210ENST00000528441 GPS2Q13227 327 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 CYP1B1Q16678 543 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 KYNUQ16719 465 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 SLC5A12Q1EHB4 618 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 TYSND1Q2T9J0 566 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 KLHL38Q2WGJ6 581 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 LINC00303Q3SY05 128 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 HSP90AA5PQ58FG0 334 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 ZC3H12BQ5HYM0 836 aaKnown RBP8.76□□□□□ -1.01
CMTM1-210ENST00000528441 UGT3A1Q6NUS8 523 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 CDHR3Q6ZTQ4 885 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 SYVN1Q86TM6 617 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 CAND1Q86VP6 1230 aaKnown RBP8.76□□□□□ -1.01
CMTM1-210ENST00000528441 CILP2Q8IUL8 1156 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 DENND6AQ8IWF6 608 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 PDIK1LQ8N165 341 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 ENDOVQ8N8Q3 282 aaKnown RBP8.76□□□□□ -1.01
CMTM1-210ENST00000528441 LMNTD1Q8N9Z9 388 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 LPGAT1Q92604 370 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 DLG3Q92796 817 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 SGSM3Q96HU1 749 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 OR2A14Q96R47 310 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 MIPEPQ99797 713 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 C17orf62Q9BQA9 187 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 ACAT2Q9BWD1 397 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 YIPF2Q9BWQ6 316 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 TRIM4Q9C037 500 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 SLC25A18Q9H1K4 315 aa8.76□□□□□ -1.01
CMTM1-210ENST00000528441 P2RY12Q9H244 342 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms