RNA–Protein interactions for RNA: ENST00000516675.1

RN7SKP49-201, Transcript of RNA, 7SK small nuclear pseudogene 49, humanhuman

BASIC

Gene RN7SKP49, Length 260 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP49-201ENST00000516675 CHST9Q7L1S5 443 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 GALNT5Q7Z7M9 940 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 PIGZQ86VD9 579 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 TICAM1Q8IUC6 712 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 ARID3BQ8IVW6 561 aaPredicted RBP1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 FAM114A1Q8IWE2 563 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 TEX11Q8IYF3 940 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 TMTC2Q8N394 836 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 DCLK2Q8N568 766 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 MAPKAPK5-AS1Q8N8E1 139 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 FAM222BQ8WU58 562 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 USP6NLQ92738 828 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 PKP2Q99959 881 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 RBM4BQ9BQ04 359 aaKnown RBP1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 SYT15Q9BQS2 421 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 FTOQ9C0B1 505 aaKnown RBP eCLIP1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 PPIL3Q9H2H8 161 aaKnown RBP1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 OLA1Q9NTK5 396 aaKnown RBP1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 SEPT11Q9NVA2 429 aaKnown RBP1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 OSER1Q9NX31 292 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 RNF186Q9NXI6 227 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 KMT2BQ9UMN6 2715 aaPredicted RBP1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 ATP10DQ9P241 1426 aa1.91□□□□□ -2.1
RN7SKP49-201ENST00000516675 C5orf42Q9H799 3197 aa1.9□□□□□ -2.1
RN7SKP49-201ENST00000516675 TOPAZ1Q8N9V7 1692 aa1.9□□□□□ -2.1
RN7SKP49-201ENST00000516675 ARHGEF5Q12774 1597 aa1.9□□□□□ -2.1
RN7SKP49-201ENST00000516675 IGLV7-46A0A075B6I9 117 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 LOC101059948A0A1B0GTJ6 334 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 MED19A0JLT2 244 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 CCDC189A1A4V9 331 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 PRR32B1ATL7 298 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ATP6V0E1O15342 81 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 USO1O60763 962 aaKnown RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 PIGNO95427 931 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 CLDN1O95832 211 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 RB1P06400 928 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 GPIP06744 558 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 PRLRP16471 622 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 EFNA1P20827 205 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 CA4P22748 312 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 GATA2P23769 480 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 CHMP24386 653 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 MAN1A1P33908 653 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ARL3P36405 182 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 HADHAP40939 763 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 SETQ01105 290 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 MELKQ14680 651 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ZNF239Q16600 458 aaKnown RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 SPINK14Q6IE38 97 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 FAAP20Q6NZ36 180 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 IL27RAQ6UWB1 636 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 AACSQ86V21 672 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 SPAG16Q8N0X2 631 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 LYG1Q8N1E2 194 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 OR2AJ1Q8NGZ0 328 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 FGFBP3Q8TAT2 258 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 RNF128Q8TEB7 428 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 SCFD2Q8WU76 684 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 NSL1Q96IY1 281 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 MAGED4Q96JG8 741 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 SGK494Q96LW2 274 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 DACH2Q96NX9 599 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 VN1R1Q9GZP7 353 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 S1PR5Q9H228 398 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ARRDC1-AS1Q9H2J1 176 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ATP13A3Q9H7F0 1226 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 SDR39U1Q9NRG7 319 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 KRT84Q9NSB2 600 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 LRWD1Q9UFC0 647 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 AMACRQ9UHK6 382 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ZHX1Q9UKY1 873 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 TRPM3Q9HCF6 1732 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 WDFY4Q6ZS81 3184 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 LRRC37A3O60309 1634 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 TULP4Q9NRJ4 1543 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 SMG1Q96Q15 3661 aaKnown RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ASPMQ8IZT6 3477 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ZFYVE9O95405 1425 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 PTCH1Q13635 1447 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 PTPRUQ92729 1446 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ABCA7Q8IZY2 2146 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 TTC28Q96AY4 2481 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ASTN2O75129 1339 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 GCC2Q8IWJ2 1684 aa1.9□□□□□ -2.11
RN7SKP49-201ENST00000516675 ADAMTS9Q9P2N4 1935 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 KIF13BQ9NQT8 1826 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 COL5A2P05997 1499 aaPredicted RBP1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 PARP4Q9UKK3 1724 aaKnown RBP1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 TNRQ92752 1358 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 TRPM1Q7Z4N2 1603 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 CFAP54Q96N23 3096 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 MSGN1A6NI15 193 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 HEPACAM2A8MVW5 462 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 SLCO1B7G3V0H7 640 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 ZNF195O14628 629 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 XRCC3O43542 346 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 PI15O43692 258 aa1.89□□□□□ -2.11
RN7SKP49-201ENST00000516675 KHDRBS3O75525 346 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms