RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 KCTD14Q9BQ13 255 aaPredicted RBP8.62□□□□□ -1.03
CASC9-201ENST00000504531 TMEM79Q9BSE2 394 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 FEM1AQ9BSK4 669 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 FAM126AQ9BYI3 521 aaPredicted RBP8.62□□□□□ -1.03
CASC9-201ENST00000504531 UNKQ9C0B0 810 aaKnown RBP8.62□□□□□ -1.03
CASC9-201ENST00000504531 NACA2Q9H009 215 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 CLPBQ9H078 707 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 NANOGQ9H9S0 305 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 DDX18Q9NVP1 670 aaKnown RBP8.62□□□□□ -1.03
CASC9-201ENST00000504531 CD274Q9NZQ7 290 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 GALPQ9UBC7 116 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 ZNF225Q9UK10 706 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 PACSIN3Q9UKS6 424 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 MAPRE3Q9UPY8 281 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 FAM50BQ9Y247 325 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 FIS1Q9Y3D6 152 aa8.62□□□□□ -1.03
CASC9-201ENST00000504531 ZNF106Q9H2Y7 1883 aaKnown RBP8.62□□□□□ -1.03
CASC9-201ENST00000504531 TRIM64BA6NI03 449 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 CBX4O00257 560 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 SCAMP3O14828 347 aaKnown RBP8.61□□□□□ -1.03
CASC9-201ENST00000504531 KPNA5O15131 536 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 ACOX3O15254 700 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 SLC16A5O15375 505 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 RGS14O43566 566 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 SYNCRIPO60506 623 aaKnown RBP8.61□□□□□ -1.03
CASC9-201ENST00000504531 GREM1O60565 184 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 SLITRK5O94991 958 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 SCELO95171 688 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 GJB5O95377 273 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 C1RP00736 705 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 LDLRP01130 860 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 TRBC1P01850 177 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 SOD2P04179 222 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 ASLP04424 464 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 CDH2P19022 906 aaPredicted RBP8.61□□□□□ -1.03
CASC9-201ENST00000504531 TCN1P20061 433 aaPredicted RBP8.61□□□□□ -1.03
CASC9-201ENST00000504531 CHRM3P20309 590 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 AKT1P31749 480 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 OR1D2P34982 312 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 MSX2P35548 267 aaPredicted RBP8.61□□□□□ -1.03
CASC9-201ENST00000504531 HK3P52790 923 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 ARPP19P56211 112 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 NUP107P57740 925 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 LIPEQ05469 1076 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 GRSF1Q12849 480 aaKnown RBP eCLIP8.61□□□□□ -1.03
CASC9-201ENST00000504531 TRAF2Q12933 501 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 RALGDSQ12967 914 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 TUBA3CQ13748 450 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 KIAA0040Q15053 153 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 MYLK3Q32MK0 819 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 ZRANB3Q5FWF4 1079 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 SBSNQ6UWP8 590 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 DLEU7Q6UYE1 221 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 HTR3DQ70Z44 454 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 RPS27LQ71UM5 84 aaKnown RBP8.61□□□□□ -1.03
CASC9-201ENST00000504531 FAM214BQ7L5A3 538 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 CROCCP3Q8IVE0 287 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 RIMKLAQ8IXN7 391 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 CFAP52Q8N1V2 620 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 METTL25Q8N6Q8 603 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 TRIML2Q8N7C3 387 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 FAM156AQ8NDB6 213 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 LPCAT1Q8NF37 534 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 METTL6Q8TCB7 284 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 SH3RF2Q8TEC5 729 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 BADQ92934 168 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 PPWD1Q96BP3 646 aaKnown RBP8.61□□□□□ -1.03
CASC9-201ENST00000504531 ULK4Q96C45 1275 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 PPP1R14BQ96C90 147 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 IGSF21Q96ID5 467 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 COX4I2Q96KJ9 171 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 NSMCE3Q96MG7 304 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 ZBTB18Q99592 522 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 CLSTN3Q9BQT9 956 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 ADI1Q9BV57 179 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 HERC2P3Q9BVR0 1158 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 UGT2B28Q9BY64 529 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 CPEB1Q9BZB8 566 aaKnown RBP8.61□□□□□ -1.03
CASC9-201ENST00000504531 GPR63Q9BZJ6 419 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 MAGIXQ9H6Y5 334 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 SEMA4BQ9NPR2 832 aaPredicted RBP8.61□□□□□ -1.03
CASC9-201ENST00000504531 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.61□□□□□ -1.03
CASC9-201ENST00000504531 TMEM9Q9P0T7 183 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 ATXN10Q9UBB4 475 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 CDH7Q9ULB5 785 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 EIF3LQ9Y262 564 aaKnown RBP8.61□□□□□ -1.03
CASC9-201ENST00000504531 TMED5Q9Y3A6 229 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 CCL27Q9Y4X3 112 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 GMEB1Q9Y692 573 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 CEPT1Q9Y6K0 416 aa8.61□□□□□ -1.03
CASC9-201ENST00000504531 IGLV3-16A0A075B6K0 115 aa8.6□□□□□ -1.03
CASC9-201ENST00000504531 TMEM265A0A087WTH1 108 aa8.6□□□□□ -1.03
CASC9-201ENST00000504531 ASPDHA6ND91 283 aa8.6□□□□□ -1.03
CASC9-201ENST00000504531 NPEPPSL1A6NEC2 478 aa8.6□□□□□ -1.03
CASC9-201ENST00000504531 TBKBP1A7MCY6 615 aa8.6□□□□□ -1.03
CASC9-201ENST00000504531 CCL22O00626 93 aa8.6□□□□□ -1.03
CASC9-201ENST00000504531 PPP6CO00743 305 aa8.6□□□□□ -1.03
CASC9-201ENST00000504531 DLGAP1O14490 977 aa8.6□□□□□ -1.03
CASC9-201ENST00000504531 OR7A17O14581 309 aa8.6□□□□□ -1.03
CASC9-201ENST00000504531 LSM1O15116 133 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms