RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 TSPAN1O60635 241 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 DPM1O60762 260 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 TCF4P15884 667 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 NDUFV2P19404 249 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 RFX5P48382 616 aaPredicted RBP5.29□□□□□ -1.56
FN1-224ENST00000492816 CDKN1CP49918 316 aaPredicted RBP5.29□□□□□ -1.56
FN1-224ENST00000492816 SLC12A3P55017 1021 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 TOP3AQ13472 1001 aaPredicted RBP5.29□□□□□ -1.56
FN1-224ENST00000492816 ZSWIM7Q19AV6 140 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 CREG2Q8IUH2 290 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 LNX2Q8N448 690 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 SH2D3CQ8N5H7 860 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 KCT2Q8NC54 265 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 ANKRD27Q96NW4 1050 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 PNMA8CA0A1B0GUJ8 204 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 HTR3EA5X5Y0 456 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 FZD9O00144 591 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 CLDN5O00501 218 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 PRAMEF1O95521 474 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 SP140Q13342 867 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 EXOC3L2Q2M3D2 409 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 RBM44Q6ZP01 1051 aaKnown RBP5.29□□□□□ -1.56
FN1-224ENST00000492816 GRAMD2AQ8IUY3 354 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 ITFG1Q8TB96 612 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 BRIX1Q8TDN6 353 aaKnown RBP5.29□□□□□ -1.56
FN1-224ENST00000492816 XAGE5Q8WWM1 108 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 MYLIPQ8WY64 445 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 SMPDL3AQ92484 453 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 TRAPPC9Q96Q05 1148 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 LPIN3Q9BQK8 851 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 CRB3Q9BUF7 120 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 ULBP3Q9BZM4 244 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 UBE2ZQ9H832 354 aaPredicted RBP5.29□□□□□ -1.56
FN1-224ENST00000492816 IL20RAQ9UHF4 553 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 PMF1-BGLAPU3KQ54 211 aa5.29□□□□□ -1.56
FN1-224ENST00000492816 A0A0A0MRY4 1105 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 RFXANKO14593 260 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 LIN7AO14910 233 aaPredicted RBP5.28□□□□□ -1.56
FN1-224ENST00000492816 GNAZP19086 355 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 LHCGRP22888 699 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 SERPINB5P36952 375 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 SPIBQ01892 262 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 HERC3Q15034 1050 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 SLC25A52Q3SY17 297 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 FAM69BQ5VUD6 431 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 WDR59Q6PJI9 974 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 OR8H2Q8N162 312 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 ZNF454Q8N9F8 522 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 DTX3Q8N9I9 347 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 FBXO36Q8NEA4 188 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 OR1J2Q8NGS2 313 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 AP3S1Q92572 193 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 SPATA13Q96N96 652 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 HERC2P3Q9BVR0 1158 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 DNTTIP1Q9H147 329 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 MVB12BQ9H7P6 319 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 DNAJB11Q9UBS4 358 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 SMCO3A2RU48 225 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 SH3D21A4FU49 640 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 OR5K3A6NET4 321 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 LRRC30A6NM36 301 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 KCNK1O00180 336 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 LEFTY2O00292 366 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 ATMINO43313 823 aaPredicted RBP5.28□□□□□ -1.56
FN1-224ENST00000492816 AGFG2O95081 481 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 DLDP09622 509 aaKnown RBP5.28□□□□□ -1.56
FN1-224ENST00000492816 BMI1P35226 326 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 SLC15A1P46059 708 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 KCNJ8Q15842 424 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 SLC26A11Q86WA9 606 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 BHLHE22Q8NFJ8 381 aaPredicted RBP5.28□□□□□ -1.56
FN1-224ENST00000492816 IGDCC4Q8TDY8 1250 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 KCNN1Q92952 543 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 RFKQ969G6 155 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 RHBDF1Q96CC6 855 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 SLC35G5Q96KT7 338 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 AGO3Q9H9G7 860 aaKnown RBP5.28□□□□□ -1.56
FN1-224ENST00000492816 COMMD3-BMI1R4GMX3 469 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 NSG1A0A0A6YYJ2 146 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 FUOMA2VDF0 154 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 UGT2B11O75310 529 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 SASH3O75995 380 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 PRAMEF12O95522 483 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 IL3RAP26951 378 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 RYKP34925 604 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 OR3A3P47888 321 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 OR3A2P47893 321 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 BTN3A2P78410 334 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 BNC2Q6ZN30 1099 aaPredicted RBP5.28□□□□□ -1.56
FN1-224ENST00000492816 NUDT13Q86X67 352 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 ZNF461Q8TAF7 563 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 EDEM2Q9BV94 578 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 ACTR6Q9GZN1 396 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 EGLN1Q9GZT9 426 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 FAM198AQ9UFP1 575 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 ADAMTS5Q9UNA0 930 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 PCDHGA3Q9Y5H0 932 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 WIF1Q9Y5W5 379 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.28□□□□□ -1.56
FN1-224ENST00000492816 A0A1W2PQJ5 194 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms