RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 KLF7O75840 302 aaPredicted RBP16.61■□□□□ 0.25
SGMS1-204ENST00000492601 CD9P21926 228 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 MGAT1P26572 445 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 CXCR5P32302 372 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 NPY2RP49146 381 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 EIF3BP55884 814 aaKnown RBP16.61■□□□□ 0.25
SGMS1-204ENST00000492601 FOXL2P58012 376 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 DCDP81605 110 aaKnown RBP16.61■□□□□ 0.25
SGMS1-204ENST00000492601 RAPSNQ13702 412 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 UBAP2LQ14157 1087 aaKnown RBP16.61■□□□□ 0.25
SGMS1-204ENST00000492601 UNC5DQ6UXZ4 953 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 RAB43Q86YS6 212 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 DCUN1D3Q8IWE4 304 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 FDCSPQ8NFU4 85 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 SKA2Q8WVK7 121 aaPredicted RBP16.61■□□□□ 0.25
SGMS1-204ENST00000492601 MAIP1Q8WWC4 291 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 GBP5Q96PP8 586 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 NUDT9Q9BW91 350 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 P2RY12Q9H244 342 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 TXLNGQ9NUQ3 528 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 SYBUQ9NX95 663 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 EURLQ9NYK6 297 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.61■□□□□ 0.25
SGMS1-204ENST00000492601 GNPTGQ9UJJ9 305 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 TTC7AQ9ULT0 858 aaPredicted RBP16.61■□□□□ 0.25
SGMS1-204ENST00000492601 PLCL2Q9UPR0 1127 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 PTRH2Q9Y3E5 179 aaKnown RBP16.61■□□□□ 0.25
SGMS1-204ENST00000492601 ICE1Q9Y2F5 2266 aa16.61■□□□□ 0.25
SGMS1-204ENST00000492601 HIVEP3Q5T1R4 2406 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 TCRBV7S3A2A0A539 114 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 KRT87PA6NCN2 255 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 GOLGA8KD6RF30 607 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 GOLGA8TH3BQL2 631 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 CEACAM4O75871 244 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 SLCO2B1O94956 709 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 GRIA3P42263 894 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 BDKRB1P46663 353 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 TRIP13Q15645 432 aaPredicted RBP16.6■□□□□ 0.25
SGMS1-204ENST00000492601 PAPD7Q5XG87 772 aaKnown RBP16.6■□□□□ 0.25
SGMS1-204ENST00000492601 TLDC1Q6P9B6 456 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 C4orf22Q6V702 233 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 MED25Q71SY5 747 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 ATCAYQ86WG3 371 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 TMEM102Q8N9M5 508 aaPredicted RBP16.6■□□□□ 0.25
SGMS1-204ENST00000492601 OR2L8Q8NGY9 312 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 GSDMBQ8TAX9 411 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 PROKR1Q8TCW9 393 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 MFSD3Q96ES6 412 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 PANX3Q96QZ0 392 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 C17orf62Q9BQA9 187 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 DHRS4Q9BTZ2 278 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 MFRPQ9BY79 579 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 IFT80Q9P2H3 777 aaPredicted RBP16.6■□□□□ 0.25
SGMS1-204ENST00000492601 NDOR1Q9UHB4 597 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 TSR3Q9UJK0 312 aaKnown RBP16.6■□□□□ 0.25
SGMS1-204ENST00000492601 SLC39A10Q9ULF5 831 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 SRPK3Q9UPE1 567 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 RUVBL2Q9Y230 463 aaKnown RBP16.6■□□□□ 0.25
SGMS1-204ENST00000492601 ZKSCAN5Q9Y2L8 839 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 ZNF451Q9Y4E5 1061 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 NFS1Q9Y697 457 aa16.6■□□□□ 0.25
SGMS1-204ENST00000492601 RASGRF2O14827 1237 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 CNOT3O75175 753 aaKnown RBP16.59■□□□□ 0.25
SGMS1-204ENST00000492601 VAPBO95292 243 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 ALAS2P22557 587 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 RPS3P23396 243 aaKnown RBP eCLIP16.59■□□□□ 0.25
SGMS1-204ENST00000492601 FOLR3P41439 243 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 CD97P48960 835 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 VPS41P49754 854 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 RRADP55042 308 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 SF1Q15637 639 aaKnown RBP16.59■□□□□ 0.25
SGMS1-204ENST00000492601 CCSMST1Q4G0I0 132 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 CTSL3PQ5NE16 218 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 FIGLAQ6QHK4 219 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 OTOAQ7RTW8 1153 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 MRGPREQ86SM8 312 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 MCATQ8IVS2 390 aaKnown RBP16.59■□□□□ 0.25
SGMS1-204ENST00000492601 TMEM151BQ8IW70 566 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 MPP5Q8N3R9 675 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 NDC1Q9BTX1 674 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 LUZP4Q9P127 313 aa16.59■□□□□ 0.25
SGMS1-204ENST00000492601 G3BP2Q9UN86 482 aaKnown RBP16.59■□□□□ 0.25
SGMS1-204ENST00000492601 S1PR4O95977 384 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 TPSB2P20231 275 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 ARNTP27540 789 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 FMO4P31512 558 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 SRSF1Q07955 248 aaKnown RBP eCLIP16.58■□□□□ 0.24
SGMS1-204ENST00000492601 TPSAB1Q15661 275 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 NKAIN1Q4KMZ8 207 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 FCRL6Q6DN72 434 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 LRRC8BQ6P9F7 803 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 TTC23LQ6PF05 361 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 CNSTQ6PJW8 725 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 ZNF662Q6ZS27 426 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 LRRC6Q86X45 466 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 LRRC8AQ8IWT6 810 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 EFCAB3Q8N7B9 438 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 TRIM58Q8NG06 486 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 CPT1CQ8TCG5 803 aa16.58■□□□□ 0.24
SGMS1-204ENST00000492601 SLC22A18Q96BI1 424 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms