RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 TMEM102Q8N9M5 508 aaPredicted RBP27.33■■□□□ 1.97
HLA-C-207ENST00000484378 LMNTD1Q8N9Z9 388 aa27.33■■□□□ 1.97
HLA-C-207ENST00000484378 SKA2Q8WVK7 121 aaPredicted RBP27.33■■□□□ 1.97
HLA-C-207ENST00000484378 NDC1Q9BTX1 674 aa27.33■■□□□ 1.97
HLA-C-207ENST00000484378 HOMER3Q9NSC5 361 aa27.33■■□□□ 1.97
HLA-C-207ENST00000484378 SYBUQ9NX95 663 aa27.33■■□□□ 1.97
HLA-C-207ENST00000484378 CAMSAP3Q9P1Y5 1249 aaPredicted RBP27.33■■□□□ 1.97
HLA-C-207ENST00000484378 IFT80Q9P2H3 777 aaPredicted RBP27.33■■□□□ 1.97
HLA-C-207ENST00000484378 NDOR1Q9UHB4 597 aa27.33■■□□□ 1.97
HLA-C-207ENST00000484378 SLC39A10Q9ULF5 831 aa27.33■■□□□ 1.97
HLA-C-207ENST00000484378 KLHL20Q9Y2M5 609 aa27.33■■□□□ 1.97
HLA-C-207ENST00000484378 S1PR4O95977 384 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 TPSB2P20231 275 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 EIF3BP55884 814 aaKnown RBP27.32■■□□□ 1.96
HLA-C-207ENST00000484378 DCDP81605 110 aaKnown RBP27.32■■□□□ 1.96
HLA-C-207ENST00000484378 CDK16Q00536 496 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 GRB7Q14451 532 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 TPSAB1Q15661 275 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 PAPD7Q5XG87 772 aaKnown RBP27.32■■□□□ 1.96
HLA-C-207ENST00000484378 OTOAQ7RTW8 1153 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 ATCAYQ86WG3 371 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 OR2L8Q8NGY9 312 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 RAB11FIP5Q9BXF6 653 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 MRM3Q9HC36 420 aaKnown RBP27.32■■□□□ 1.96
HLA-C-207ENST00000484378 INTS7Q9NVH2 962 aaKnown RBP27.32■■□□□ 1.96
HLA-C-207ENST00000484378 EURLQ9NYK6 297 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 TTC7AQ9ULT0 858 aaPredicted RBP27.32■■□□□ 1.96
HLA-C-207ENST00000484378 ZNF451Q9Y4E5 1061 aa27.32■■□□□ 1.96
HLA-C-207ENST00000484378 RASGRF2O14827 1237 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 KPNA5O15131 536 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 ZNF185O15231 689 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 KLF7O75840 302 aaPredicted RBP27.31■■□□□ 1.96
HLA-C-207ENST00000484378 CEACAM4O75871 244 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 VAPBO95292 243 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 RPS3P23396 243 aaKnown RBP eCLIP27.31■■□□□ 1.961e-7■■■■□ 20.4
HLA-C-207ENST00000484378 SLC9A5Q14940 896 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 KCTD19Q17RG1 926 aaPredicted RBP27.31■■□□□ 1.96
HLA-C-207ENST00000484378 MRNIPQ6NTE8 343 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 LRRC8BQ6P9F7 803 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 CES3Q6UWW8 571 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 LRRC8AQ8IWT6 810 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 MFSD3Q96ES6 412 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 KIFC1Q9BW19 673 aa27.31■■□□□ 1.96
HLA-C-207ENST00000484378 PTRH2Q9Y3E5 179 aaKnown RBP27.31■■□□□ 1.96
HLA-C-207ENST00000484378 A6NL46 340 aa27.3■■□□□ 1.96
HLA-C-207ENST00000484378 TTLL8A6PVC2 850 aa27.3■■□□□ 1.96
HLA-C-207ENST00000484378 ARNTP27540 789 aa27.3■■□□□ 1.96
HLA-C-207ENST00000484378 FOLR3P41439 243 aa27.3■■□□□ 1.96
HLA-C-207ENST00000484378 TERF1P54274 439 aa27.3■■□□□ 1.96
HLA-C-207ENST00000484378 MRGPREQ86SM8 312 aa27.3■■□□□ 1.96
HLA-C-207ENST00000484378 SDCCAG8Q86SQ7 713 aaPredicted RBP27.3■■□□□ 1.96
HLA-C-207ENST00000484378 FDCSPQ8NFU4 85 aa27.3■■□□□ 1.96
HLA-C-207ENST00000484378 PCDHGB7Q9Y5F8 929 aa27.3■■□□□ 1.96
HLA-C-207ENST00000484378 MRFAP1Q9Y605 127 aa27.3■■□□□ 1.96
HLA-C-207ENST00000484378 TCRBV7S3A2A0A539 114 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 CD63P08962 238 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 BDKRB1P46663 353 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 CD97P48960 835 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 VPS41P49754 854 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 SF1Q15637 639 aaKnown RBP27.29■■□□□ 1.96
HLA-C-207ENST00000484378 TRIP13Q15645 432 aaPredicted RBP27.29■■□□□ 1.96
HLA-C-207ENST00000484378 NADK2Q4G0N4 442 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 NKAIN1Q4KMZ8 207 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 RNF187Q5TA31 235 aaPredicted RBP27.29■■□□□ 1.96
HLA-C-207ENST00000484378 MCATQ8IVS2 390 aaKnown RBP27.29■■□□□ 1.96
HLA-C-207ENST00000484378 RAB42Q8N4Z0 105 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 PRELID2Q8N945 189 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 DLG3Q92796 817 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 RAD51AP1Q96B01 352 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 IP6K3Q96PC2 410 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 NUDT9Q9BW91 350 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 GPR83Q9NYM4 423 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 SOX13Q9UN79 622 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 RUVBL2Q9Y230 463 aaKnown RBP27.29■■□□□ 1.96
HLA-C-207ENST00000484378 NFS1Q9Y697 457 aa27.29■■□□□ 1.96
HLA-C-207ENST00000484378 DOPEY2Q9Y3R5 2298 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 PCSK5Q92824 1860 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 GOLGA8KD6RF30 607 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 GOLGA8TH3BQL2 631 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 PFDN6O15212 129 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 NRDCO43847 1150 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 CCZ1BP86790 482 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 CCZ1P86791 482 aaPredicted RBP27.28■■□□□ 1.96
HLA-C-207ENST00000484378 UBAP2LQ14157 1087 aaKnown RBP27.28■■□□□ 1.96
HLA-C-207ENST00000484378 SSPNQ14714 243 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 CTSL3PQ5NE16 218 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 CNSTQ6PJW8 725 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 EFCAB3Q8N7B9 438 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 OR2Y1Q8NGV0 311 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 FOPNLQ96NB1 174 aa27.28■■□□□ 1.96
HLA-C-207ENST00000484378 TSR3Q9UJK0 312 aaKnown RBP27.28■■□□□ 1.96
HLA-C-207ENST00000484378 PRRC2CQ9Y520 2896 aaKnown RBP27.27■■□□□ 1.96
HLA-C-207ENST00000484378 MAST4O15021 2626 aa27.27■■□□□ 1.96
HLA-C-207ENST00000484378 C1orf105O95561 183 aa27.27■■□□□ 1.96
HLA-C-207ENST00000484378 SARNPP82979 210 aaKnown RBP27.27■■□□□ 1.96
HLA-C-207ENST00000484378 GPS1Q13098 491 aa27.27■■□□□ 1.96
HLA-C-207ENST00000484378 TYSND1Q2T9J0 566 aa27.27■■□□□ 1.96
HLA-C-207ENST00000484378 LPGAT1Q92604 370 aa27.27■■□□□ 1.96
HLA-C-207ENST00000484378 PPP2R2CQ9Y2T4 447 aa27.27■■□□□ 1.96
HLA-C-207ENST00000484378 PEX12O00623 359 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms