RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 BEX2Q9BXY8 128 aa13.14□□□□□ -0.31
DFFB-209ENST00000477548 RUBCNLQ9H714 662 aa13.14□□□□□ -0.31
DFFB-209ENST00000477548 GOLGA2P5Q9HBQ8 144 aa13.14□□□□□ -0.31
DFFB-209ENST00000477548 FKBP14Q9NWM8 211 aa13.14□□□□□ -0.31
DFFB-209ENST00000477548 ERAP1Q9NZ08 941 aa13.14□□□□□ -0.31
DFFB-209ENST00000477548 PCTPQ9UKL6 214 aa13.14□□□□□ -0.31
DFFB-209ENST00000477548 NDRG4Q9ULP0 352 aaKnown RBP13.14□□□□□ -0.31
DFFB-209ENST00000477548 UBQLN1Q9UMX0 589 aaKnown RBP13.14□□□□□ -0.31
DFFB-209ENST00000477548 PPP2R3BQ9Y5P8 575 aa13.14□□□□□ -0.31
DFFB-209ENST00000477548 FNDC1Q4ZHG4 1894 aaPredicted RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 NPEPPSL1A6NEC2 478 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 C12orf71A8MTZ7 269 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 GABRDO14764 452 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 CD3EAPO15446 510 aaKnown RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 CPNE3O75131 537 aaKnown RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 ZNF682O95780 498 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 IL7P13232 177 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 AKAP5P24588 427 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 CA5AP35218 305 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 OR3A3P47888 321 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 TAF6P49848 677 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 UGT2B15P54855 530 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 CREMQ03060 361 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 ELP6Q0PNE2 266 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 SLAMF1Q13291 335 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 KIAA1614Q5VZ46 1190 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 RAP1GAP2Q684P5 730 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 MRNIPQ6NTE8 343 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 SLC46A3Q7Z3Q1 461 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 NPLOC4Q8TAT6 608 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 DNASE1L2Q92874 299 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 CDCA5Q96FF9 252 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 FYTTD1Q96QD9 318 aaKnown RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 OR2A14Q96R47 310 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 SDHCQ99643 169 aaPredicted RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 MKRN2Q9H000 416 aaKnown RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 SYTL2Q9HCH5 934 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 AMBNQ9NP70 447 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 NT5MQ9NPB1 228 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 KRT84Q9NSB2 600 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 KLK14Q9P0G3 267 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 PDP1Q9P0J1 537 aaPredicted RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 IKZF3Q9UKT9 509 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 A0A1W2PQ72 361 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 BTN3A1O00481 513 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 CTDSP2O14595 271 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 WBP4O75554 376 aaKnown RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 ITGA2P17301 1181 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 HOXB8P17481 243 aaPredicted RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 MAGEA11P43364 429 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 AP5B1Q2VPB7 878 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 FAM174BQ3ZCQ3 159 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 C9orf131Q5VYM1 1079 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 KDM4DQ6B0I6 523 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 CCDC190Q86UF4 302 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 CHPFQ8IZ52 775 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 FAM109AQ8N4B1 249 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 METTL6Q8TCB7 284 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 TRNT1Q96Q11 434 aaKnown RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 ARNT2Q9HBZ2 717 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 UBA2Q9UBT2 640 aaPredicted RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 EIF2B4Q9UI10 523 aaKnown RBP13.13□□□□□ -0.31
DFFB-209ENST00000477548 KLHL20Q9Y2M5 609 aa13.13□□□□□ -0.31
DFFB-209ENST00000477548 A0A0U1RQS6 177 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 PIRO00625 290 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 ANKRD28O15084 1053 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 TLL1O43897 1013 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 PCDHGA12O60330 932 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 HSMCR30P0CW71 290 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 COL6A1P12109 1028 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 HTR6P50406 440 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 RAD51Q06609 339 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 PTPRCAPQ14761 206 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 TRIM60Q495X7 471 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 VN1R5Q7Z5H4 357 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 TAC4Q86UU9 113 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 GTF2H4Q92759 462 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 FAM120BQ96EK7 910 aaKnown RBP13.12□□□□□ -0.31
DFFB-209ENST00000477548 MAP6Q96JE9 813 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 RNF170Q96K19 258 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 SLC25A51Q9H1U9 297 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 POPDC3Q9HBV1 291 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 NUFIP1Q9UHK0 495 aaKnown RBP13.12□□□□□ -0.31
DFFB-209ENST00000477548 MAFFQ9ULX9 164 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 A0A0G2JMP0 313 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 RGS5O15539 181 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 SEC22BO75396 215 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 RECQL4O94761 1208 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 DIRAS1O95057 198 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 RPP38P78345 283 aaKnown RBP13.12□□□□□ -0.31
DFFB-209ENST00000477548 CD83Q01151 205 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 GTDC1Q4AE62 458 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 OR2T5Q6IEZ7 315 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.12□□□□□ -0.31
DFFB-209ENST00000477548 ST13P5Q8NFI4 369 aaPredicted RBP13.12□□□□□ -0.31
DFFB-209ENST00000477548 OR52B6Q8NGF0 335 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 OR52E4Q8NGH9 312 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 OR2T29Q8NH02 315 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 C1orf74Q96LT6 269 aa13.12□□□□□ -0.31
DFFB-209ENST00000477548 RIPOR3Q96MK2 946 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms