RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 KATNA1O75449 491 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 MATN4O95460 622 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 TCN2P20062 427 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 ATP5DP30049 168 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 PAFAH1B1P43034 410 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 COL9A2Q14055 689 aaPredicted RBP20.41■□□□□ 0.86
LIME1-204ENST00000476183 MORF4L2Q15014 288 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 DEFB110Q30KQ9 67 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 BBS9Q3SYG4 887 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 KCNMB4Q86W47 210 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 LMNTD2Q8IXW0 634 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 DENND1AQ8TEH3 1009 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 RAD51AP1Q96B01 352 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 MED8Q96G25 268 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 TCTN2Q96GX1 697 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 WDR83Q9BRX9 315 aaKnown RBP20.41■□□□□ 0.86
LIME1-204ENST00000476183 CHRNA10Q9GZZ6 450 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 KLHL20Q9Y2M5 609 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 PCDHGA6Q9Y5G7 932 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 E5RI56 91 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 H3BMH7 237 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 MAP3K7O43318 606 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 HAUS5O94927 633 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 CTSBP07858 339 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 ERVK-10P10266 1014 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 RORAP35398 523 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 HP1BP3Q5SSJ5 553 aaPredicted RBP20.4■□□□□ 0.86
LIME1-204ENST00000476183 LCN10Q6JVE6 187 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 HIBCHQ6NVY1 386 aaPredicted RBP20.4■□□□□ 0.86
LIME1-204ENST00000476183 C16orf46Q6P387 395 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 BORAQ6PGQ7 559 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 ZNF517Q6ZMY9 492 aaPredicted RBP20.4■□□□□ 0.86
LIME1-204ENST00000476183 CALML6Q8TD86 181 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 FOPNLQ96NB1 174 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 ARHGAP9Q9BRR9 750 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 RNF14Q9UBS8 474 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 KCND3Q9UK17 655 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 SLC39A10Q9ULF5 831 aa20.4■□□□□ 0.86
LIME1-204ENST00000476183 FER1L5A0AVI2 2057 aa20.39■□□□□ 0.86
LIME1-204ENST00000476183 ARHGEF33A8MVX0 844 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 PRICKLE3O43900 615 aaPredicted RBP20.39■□□□□ 0.85
LIME1-204ENST00000476183 SEC31AO94979 1220 aaKnown RBP20.39■□□□□ 0.85
LIME1-204ENST00000476183 FURINP09958 794 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 CYP2A7P20853 494 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 MAGP20916 626 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 CCNFP41002 786 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 ITGA8P53708 1063 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 ITGA1P56199 1179 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 MRPS25P82663 173 aaKnown RBP20.39■□□□□ 0.85
LIME1-204ENST00000476183 MC1RQ01726 317 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 C19orf57Q0VDD7 668 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 CUL1Q13616 776 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 KLHL38Q2WGJ6 581 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 CRTC2Q53ET0 693 aaPredicted RBP20.39■□□□□ 0.85
LIME1-204ENST00000476183 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.39■□□□□ 0.85
LIME1-204ENST00000476183 TTC23LQ6PF05 361 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 DSELQ8IZU8 1212 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 DNAJC22Q8N4W6 341 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 C2CD4AQ8NCU7 369 aaPredicted RBP20.39■□□□□ 0.85
LIME1-204ENST00000476183 KCNJ9Q92806 393 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 MR1Q95460 341 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 LRFN5Q96NI6 719 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 CATSPER2Q96P56 530 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 KRT12Q99456 494 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 FAM167BQ9BTA0 163 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 TRIM31Q9BZY9 425 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 CHST8Q9H2A9 424 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 ACTR5Q9H9F9 607 aaPredicted RBP20.39■□□□□ 0.85
LIME1-204ENST00000476183 PCMTD2Q9NV79 361 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 SERTAD3Q9UJW9 196 aa20.39■□□□□ 0.85
LIME1-204ENST00000476183 HELZ2Q9BYK8 2649 aaKnown RBP20.38■□□□□ 0.85
LIME1-204ENST00000476183 C21orf140B9A014 251 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 E7EQ34 232 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 MEN1O00255 615 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 ZNF749O43361 778 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 TTC4O95801 387 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 GABRB3P28472 473 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 ELK3P41970 407 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 RPS18P62269 152 aaKnown RBP20.38■□□□□ 0.85
LIME1-204ENST00000476183 ERV3-1Q14264 604 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 DEFB109BQ30KR1 87 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 SPANXN3Q5MJ09 141 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 GPR21Q99679 349 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 NAT9Q9BTE0 207 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 AARSD1Q9BTE6 412 aaKnown RBP20.38■□□□□ 0.85
LIME1-204ENST00000476183 RAB11FIP5Q9BXF6 653 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 SPRTNQ9H040 489 aaPredicted RBP20.38■□□□□ 0.85
LIME1-204ENST00000476183 CCDC68Q9H2F9 335 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 ACTL8Q9H568 366 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 KLHL42Q9P2K6 505 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 SLC17A6Q9P2U8 582 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 MRFAP1Q9Y605 127 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 BAHCC1Q9P281 2608 aa20.38■□□□□ 0.85
LIME1-204ENST00000476183 GCN1Q92616 2671 aaKnown RBP20.37■□□□□ 0.85
LIME1-204ENST00000476183 A0A1W2PPV9 198 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 PSIP1O75475 530 aaKnown RBP20.37■□□□□ 0.85
LIME1-204ENST00000476183 CREG1O75629 220 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 PSMB5P28074 263 aa20.37■□□□□ 0.85
LIME1-204ENST00000476183 RPL21P46778 160 aaKnown RBP20.37■□□□□ 0.85
LIME1-204ENST00000476183 TIAL1Q01085 375 aaKnown RBP eCLIP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms