RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 HOMER3Q9NSC5 361 aa8.6□□□□□ -1.03
CHEK2-223ENST00000472807 TREX1Q9NSU2 369 aa8.6□□□□□ -1.03
CHEK2-223ENST00000472807 INTS7Q9NVH2 962 aaKnown RBP8.6□□□□□ -1.03
CHEK2-223ENST00000472807 MARCH4Q9P2E8 410 aaPredicted RBP8.6□□□□□ -1.03
CHEK2-223ENST00000472807 NDOR1Q9UHB4 597 aa8.6□□□□□ -1.03
CHEK2-223ENST00000472807 SLC39A10Q9ULF5 831 aa8.6□□□□□ -1.03
CHEK2-223ENST00000472807 PLCL2Q9UPR0 1127 aa8.6□□□□□ -1.03
CHEK2-223ENST00000472807 CDYLQ9Y232 598 aa8.6□□□□□ -1.03
CHEK2-223ENST00000472807 PLAAQ9Y263 795 aa8.6□□□□□ -1.03
CHEK2-223ENST00000472807 ZNF451Q9Y4E5 1061 aa8.6□□□□□ -1.03
CHEK2-223ENST00000472807 MRFAP1Q9Y605 127 aa8.6□□□□□ -1.03
CHEK2-223ENST00000472807 TNRC6AQ8NDV7 1962 aaKnown RBP8.6□□□□□ -1.03
CHEK2-223ENST00000472807 UTP20O75691 2785 aaKnown RBP8.6□□□□□ -1.03
CHEK2-223ENST00000472807 RASGRF2O14827 1237 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 CEP104O60308 925 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 SLCO2B1O94956 709 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 TPSB2P20231 275 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 MAGP20916 626 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 CD9P21926 228 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 RPS3P23396 243 aaKnown RBP eCLIP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 PEBP1P30086 187 aaKnown RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 OTX2P32243 289 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 FOLR3P41439 243 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 EIF3BP55884 814 aaKnown RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 DCDP81605 110 aaKnown RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 CDK16Q00536 496 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 ATP1A4Q13733 1029 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 TPSAB1Q15661 275 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 KYNUQ16719 465 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 RNF187Q5TA31 235 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 MLIPQ5VWP3 458 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 PAPD7Q5XG87 772 aaKnown RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 ZNF385CQ66K41 422 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 MRNIPQ6NTE8 343 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 LRRC8BQ6P9F7 803 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 OTOAQ7RTW8 1153 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 MRGPREQ86SM8 312 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 SDCCAG8Q86SQ7 713 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 TAX1BP1Q86VP1 789 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 KRT222Q8N1A0 295 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 ZNF655Q8N720 491 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 EFCAB3Q8N7B9 438 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 LINC01555Q8NAE3 123 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 OR2L8Q8NGY9 312 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 DENND1AQ8TEH3 1009 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 MIB2Q96AX9 1013 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 FOPNLQ96NB1 174 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 IP6K3Q96PC2 410 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 GBP5Q96PP8 586 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 SPRTNQ9H040 489 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 P2RY12Q9H244 342 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 MRM3Q9HC36 420 aaKnown RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 SYBUQ9NX95 663 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 GPR83Q9NYM4 423 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 IFT80Q9P2H3 777 aaPredicted RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 PTRH2Q9Y3E5 179 aaKnown RBP8.59□□□□□ -1.03
CHEK2-223ENST00000472807 PCDHGB7Q9Y5F8 929 aa8.59□□□□□ -1.03
CHEK2-223ENST00000472807 A6NL46 340 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 TTLL8A6PVC2 850 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 H3BMH7 237 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 H3BMM5 538 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 PEX12O00623 359 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 ZNF185O15231 689 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 HCRTR1O43613 425 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 DPM1O60762 260 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 KLF7O75840 302 aaPredicted RBP8.58□□□□□ -1.04
CHEK2-223ENST00000472807 CEACAM4O75871 244 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 VAPBO95292 243 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 FKBP9O95302 570 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 IGHEP01854 428 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 CBSLP0DN79 551 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 PAMP19021 973 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 MGAT1P26572 445 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 NMBRP28336 390 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 CXCR5P32302 372 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 CBSP35520 551 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 CCNFP41002 786 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 KCNJ1P48048 391 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 GABRA4P48169 554 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 CD97P48960 835 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 ARSFP54793 590 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 MLLT10P55197 1068 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 SARNPP82979 210 aaKnown RBP8.58□□□□□ -1.04
CHEK2-223ENST00000472807 SLC9A5Q14940 896 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 SF1Q15637 639 aaKnown RBP8.58□□□□□ -1.04
CHEK2-223ENST00000472807 NKAIN1Q4KMZ8 207 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 ZC3H12BQ5HYM0 836 aaKnown RBP8.58□□□□□ -1.04
CHEK2-223ENST00000472807 ARMC3Q5W041 872 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 CASC4Q6P4E1 433 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 HPS6Q86YV9 775 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 LRRC8AQ8IWT6 810 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 FAM20CQ8IXL6 584 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 DNAJC22Q8N4W6 341 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 C2orf73Q8N5S3 287 aaPredicted RBP8.58□□□□□ -1.04
CHEK2-223ENST00000472807 ZBTB2Q8N680 514 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 CLEC1AQ8NC01 280 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 FDCSPQ8NFU4 85 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 OR2Y1Q8NGV0 311 aa8.58□□□□□ -1.04
CHEK2-223ENST00000472807 MAGEC3Q8TD91 643 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms