RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 GNPTGQ9UJJ9 305 aa21.7■■□□□ 1.06
C9orf3-213ENST00000471978 ZKSCAN5Q9Y2L8 839 aa21.7■■□□□ 1.06
C9orf3-213ENST00000471978 KLHL20Q9Y2M5 609 aa21.7■■□□□ 1.06
C9orf3-213ENST00000471978 USP9XQ93008 2570 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-213ENST00000471978 CLEC18AA5D8T8 446 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 AP3B1O00203 1094 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 FGGP02679 453 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 NMBRP28336 390 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 NPY2RP49146 381 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 GRB7Q14451 532 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 SSPNQ14714 243 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 CLEC18BQ6UXF7 455 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 TAX1BP1Q86VP1 789 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 EFCAB3Q8N7B9 438 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 CLEC18CQ8NCF0 446 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 GSDMBQ8TAX9 411 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 CPT1CQ8TCG5 803 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 MAIP1Q8WWC4 291 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 COL26A1Q96A83 441 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 IL17FQ96PD4 163 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 PANX3Q96QZ0 392 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 NDC1Q9BTX1 674 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 P2RY12Q9H244 342 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 EURLQ9NYK6 297 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.69■■□□□ 1.06
C9orf3-213ENST00000471978 SLC39A10Q9ULF5 831 aa21.69■■□□□ 1.06
C9orf3-213ENST00000471978 PTRH2Q9Y3E5 179 aaKnown RBP21.69■■□□□ 1.06
C9orf3-213ENST00000471978 RP1L1Q8IWN7 2480 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-213ENST00000471978 NDUFS3O75489 264 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 CD63P08962 238 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 FOLR3P41439 243 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 KCNJ1P48048 391 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 SLC9A5Q14940 896 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 NKAIN1Q4KMZ8 207 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 MRGPREQ86SM8 312 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 MCATQ8IVS2 390 aaKnown RBP21.68■■□□□ 1.06
C9orf3-213ENST00000471978 MPP5Q8N3R9 675 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 OR2L8Q8NGY9 312 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 IP6K3Q96PC2 410 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 GPR83Q9NYM4 423 aa21.68■■□□□ 1.06
C9orf3-213ENST00000471978 SNRNP200O75643 2136 aaKnown RBP21.68■■□□□ 1.06
C9orf3-213ENST00000471978 FER1L5A0AVI2 2057 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 PCSK5Q92824 1860 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 RASGRF2O14827 1237 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 DPM1O60762 260 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 VPS4BO75351 444 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 S1PR4O95977 384 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 CCDC175P0C221 793 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 MGAT1P26572 445 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 SRSF1Q07955 248 aaKnown RBP eCLIP21.67■■□□□ 1.066e-7■■■□□ 17.9
C9orf3-213ENST00000471978 RAPSNQ13702 412 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 SF1Q15637 639 aaKnown RBP21.67■■□□□ 1.06
C9orf3-213ENST00000471978 TTC23LQ6PF05 361 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 ZNF662Q6ZS27 426 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 OTOAQ7RTW8 1153 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 LRRC6Q86X45 466 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 FAM26EQ8N5C1 309 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 OTUD6BQ8N6M0 293 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 OR2Y1Q8NGV0 311 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 SKA2Q8WVK7 121 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-213ENST00000471978 INTS7Q9NVH2 962 aaKnown RBP21.67■■□□□ 1.06
C9orf3-213ENST00000471978 TTC7AQ9ULT0 858 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-213ENST00000471978 VPS4AQ9UN37 437 aa21.67■■□□□ 1.06
C9orf3-213ENST00000471978 USP9YO00507 2555 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-213ENST00000471978 KPNA5O15131 536 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 CEP104O60308 925 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 SORBS2O94875 1100 aaKnown RBP21.66■■□□□ 1.06
C9orf3-213ENST00000471978 ALAS2P22557 587 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 RPS3P23396 243 aaKnown RBP eCLIP21.66■■□□□ 1.06
C9orf3-213ENST00000471978 EIF3BP55884 814 aaKnown RBP21.66■■□□□ 1.06
C9orf3-213ENST00000471978 JMJD6Q6NYC1 403 aaPredicted RBP21.66■■□□□ 1.06
C9orf3-213ENST00000471978 HPS6Q86YV9 775 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 DLG3Q92796 817 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 RAD51AP1Q96B01 352 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 FER1L6-AS2Q96M78 137 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 KIFC1Q9BW19 673 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 RAB11FIP5Q9BXF6 653 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 MFRPQ9BY79 579 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 SYBUQ9NX95 663 aa21.66■■□□□ 1.06
C9orf3-213ENST00000471978 PEX12O00623 359 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 CNOT3O75175 753 aaKnown RBP21.65■■□□□ 1.06
C9orf3-213ENST00000471978 VAPBO95292 243 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 FOXL2P58012 376 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 CDK16Q00536 496 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 KCTD19Q17RG1 926 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-213ENST00000471978 FCRL6Q6DN72 434 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 MRPL14Q6P1L8 145 aaKnown RBP21.65■■□□□ 1.06
C9orf3-213ENST00000471978 LRRC8BQ6P9F7 803 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 FIGLAQ6QHK4 219 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 CES3Q6UWW8 571 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 SDCCAG8Q86SQ7 713 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-213ENST00000471978 GALNT11Q8NCW6 608 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 TRIM58Q8NG06 486 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 PTERQ96BW5 349 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 MFSD3Q96ES6 412 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 SMAD5Q99717 465 aaKnown RBP21.65■■□□□ 1.06
C9orf3-213ENST00000471978 MRM3Q9HC36 420 aaKnown RBP21.65■■□□□ 1.06
C9orf3-213ENST00000471978 HOMER3Q9NSC5 361 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 MAP4K5Q9Y4K4 846 aa21.65■■□□□ 1.06
C9orf3-213ENST00000471978 MRFAP1Q9Y605 127 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms