RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FOXQ1Q9C009 403 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 TANC1Q9C0D5 1861 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ROGDIQ9GZN7 287 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 C20orf27Q9GZN8 174 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SHARPINQ9H0F6 387 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 DCSTAMPQ9H295 470 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 FN3KQ9H479 309 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 PIGUQ9H490 435 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 DUSP21Q9H596 190 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 RNF121Q9H920 327 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 POPDC2Q9HBU9 364 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 BIN3Q9NQY0 253 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 KLHL1Q9NR64 748 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ASAH2Q9NR71 780 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SDHAF3Q9NRP4 125 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 C1orf112Q9NSG2 853 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 FAM49BQ9NUQ9 324 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 OXSMQ9NWU1 459 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 TRPM5Q9NZQ8 1165 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 OPTCQ9UBM4 332 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 MORF4L1Q9UBU8 362 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 TJP2Q9UDY2 1190 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CYB5R1Q9UHQ9 305 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 TMPRSS11EQ9UL52 423 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ZFR2Q9UPR6 939 aaKnown RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 AURKCQ9UQB9 309 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 PCDHB5Q9Y5E4 795 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 TNPO3Q9Y5L0 923 aaKnown RBP4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SCN7AQ01118 1682 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ROBO1Q9Y6N7 1651 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 SLIT2O94813 1529 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 NHSL1Q5SYE7 1610 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 FRMPD2Q68DX3 1309 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CDK5RAP2Q96SN8 1893 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 XIRP1Q702N8 1843 aaKnown RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 A0A1B0GVI7 797 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF503-AS2A6NEH8 195 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 PRORSD1PA6NEY8 169 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 SLC15A5A6NIM6 579 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 WTIPA6NIX2 430 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 A6NL46 340 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 E9PAM4 449 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 H0YCG3 227 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 STX16-NPEPL1H3BU86 382 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 H7C2Y5 167 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 SLC1A7O00341 560 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 NFIBO00712 420 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CYB561D2O14569 222 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CLIC2O15247 247 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CD3EAPO15446 510 aaKnown RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 SLC37A4O43826 429 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 ORC5O43913 435 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 AIREO43918 545 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 HS6ST1O60243 411 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 HCN1O60741 890 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 LRCH4O75427 683 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 PPM1BO75688 479 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 ZMPSTE24O75844 475 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CFBP00751 764 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 TNNC2P02585 160 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 AHSGP02765 367 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 ALPLP05186 524 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 RB1P06400 928 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 TPOP07202 933 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 ZSCAN5DPP0CG00 497 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 SMIM6P0DI80 62 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 PF4V1P10720 104 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CYP2A6P11509 494 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 SLC2A4P14672 509 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 PGAM1P18669 254 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 MSH3P20585 1137 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 ITGALP20701 1170 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 EFNA1P20827 205 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 MYL9P24844 172 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 S100PP25815 95 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 IL1R2P27930 398 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CDH5P33151 784 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 HNF1BP35680 557 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 NUP62P37198 522 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 PIK3CBP42338 1070 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CTSKP43235 329 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 GSTM5P46439 218 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 SEPHS1P49903 392 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CYP2J2P51589 502 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 PRELPP51888 382 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 ARHGDIAP52565 204 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 GTF2A2P52657 109 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 PER3P56645 1201 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 HUNKP57058 714 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 BTG1P62324 171 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 YWHAZP63104 245 aaKnown RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 HSF2Q03933 536 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 EMX1Q04741 257 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CHRNB3Q05901 458 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 MGAT3Q09327 533 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 ELP6Q0PNE2 266 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 STX4Q12846 297 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 ABRQ12979 859 aa4.75□□□□□ -1.65
SF3B1-207ENST00000468925 FASTKQ14296 549 aaKnown RBP4.75□□□□□ -1.65
SF3B1-207ENST00000468925 CLCA4Q14CN2 919 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 488.9 ms