RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-229	ENST00000460826	RAB11FIP2	Q7L804	512 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	PRSS42	Q7Z5A4	293 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	FAM20C	Q8IXL6	584 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	MAGEC3	Q8TD91	643 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	CAVIN3	Q969G5	261 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	PRR11	Q96HE9	360 aa	Predicted RBP	13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	UBXN10	Q96LJ8	280 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	OR2A14	Q96R47	310 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	STRADB	Q9C0K7	418 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	PARVB	Q9HBI1	364 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	OCIAD1	Q9NX40	245 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	SEMA5B	Q9P283	1151 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	SATB2	Q9UPW6	733 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	LOXL2	Q9Y4K0	774 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	IKBKG	Q9Y6K9	419 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	WDFY3	Q8IZQ1	3526 aa		13.54	□□□□□ -0.24
HDLBP-229	ENST00000460826	MDC1	Q14676	2089 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	TLCD2	A6NGC4	264 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	C2orf74	A8MZ97	194 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	ISM1	B1AKI9	464 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	HGS	O14964	777 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	PRICKLE3	O43900	615 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	RASSF9	O75901	435 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	SLC16A8	O95907	504 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	MPO	P05164	745 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	C2	P06681	752 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	ANKRD34C	P0C6C1	535 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	CCL4	P13236	92 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	PVR	P15151	417 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	CD1D	P15813	335 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	ITIH1	P19827	911 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	MAP4	P27816	1152 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	PSMB5	P28074	263 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	IMPA1	P29218	277 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	CRABP2	P29373	138 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	ETV5	P41161	510 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	MAGEA12	P43365	314 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	SERPINB8	P50452	374 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	CSHL1	Q14406	222 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	TSN	Q15631	228 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	CYP2A13	Q16696	494 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	PPP1R3A	Q16821	1122 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	ANKS6	Q68DC2	871 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	FOXR1	Q6PIV2	292 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	SPESP1	Q6UW49	350 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	RAPH1	Q70E73	1250 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	CENPL	Q8N0S6	344 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	PPFIBP2	Q8ND30	876 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	OR2W6P	Q8NHA6	318 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	WDR36	Q8NI36	951 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	HMGCLL1	Q8TB92	370 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	MCOLN3	Q8TDD5	553 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	ZNF480	Q8WV37	535 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	KCTD4	Q8WVF5	259 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	KLHL6	Q8WZ60	621 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	ISL2	Q96A47	359 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	PTER	Q96BW5	349 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	GRAMD1A	Q96CP6	724 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	RAB11FIP5	Q9BXF6	653 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	DERL2	Q9GZP9	239 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	KLHL25	Q9H0H3	589 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	ZNF768	Q9H5H4	540 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	IGSF5	Q9NSI5	407 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	CTNNAL1	Q9UBT7	734 aa		13.53	□□□□□ -0.24
HDLBP-229	ENST00000460826	ASPM	Q8IZT6	3477 aa		13.52	□□□□□ -0.24
HDLBP-229	ENST00000460826	SLC9B1P1	A6NJY1	282 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	MATN2	O00339	956 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	TOX3	O15405	576 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	PRAMEF10	O60809	474 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	KRT38	O76015	456 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	ST6GAL1	P15907	406 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	CDH3	P22223	829 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	TYK2	P29597	1187 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	CSTF2	P33240	577 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	PNLIPRP1	P54315	467 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	YBX1	P67809	324 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	GABRE	P78334	506 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	KIR2DS3	Q14952	304 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	OR4D1	Q15615	310 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	SUSD1	Q6UWL2	747 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	TAOK1	Q7L7X3	1001 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	FBXO39	Q8N4B4	442 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	EPS8L3	Q8TE67	593 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	ANKRD7	Q92527	254 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	GATA6	Q92908	595 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	PMEPA1	Q969W9	287 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	NXNL1	Q96CM4	212 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	SLC41A2	Q96JW4	573 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	TRAPPC9	Q96Q05	1148 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	CD180	Q99467	661 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	PITPNM3	Q9BZ71	974 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	NRSN2	Q9GZP1	204 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	POLR1B	Q9H9Y6	1135 aa		13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	SIDT1	Q9NXL6	827 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	UTP6	Q9NYH9	597 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-229	ENST00000460826	STOX2	Q9P2F5	926 aa	Predicted RBP	13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms