RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PEX12O00623 359 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 NRDCO43847 1150 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 DPM1O60762 260 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 VPS4BO75351 444 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 SLCO2B1O94956 709 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 S1PR4O95977 384 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 MGAT1P26572 445 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 NMBRP28336 390 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 KCNJ1P48048 391 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 GABRA4P48169 554 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 EIF3BP55884 814 aaKnown RBP17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 SF1Q15637 639 aaKnown RBP17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 MRNIPQ6NTE8 343 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 SDCCAG8Q86SQ7 713 aaPredicted RBP17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 FAM20CQ8IXL6 584 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 DNAJC22Q8N4W6 341 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 LINC01555Q8NAE3 123 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 FDCSPQ8NFU4 85 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 OR2L8Q8NGY9 312 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 DENND1AQ8TEH3 1009 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 FOPNLQ96NB1 174 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 GBP5Q96PP8 586 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 MLXIPLQ9NP71 852 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 TREX1Q9NSU2 369 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 EURLQ9NYK6 297 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 TTC7AQ9ULT0 858 aaPredicted RBP17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 VPS4AQ9UN37 437 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 KLHL20Q9Y2M5 609 aa17.76■□□□□ 0.43
AC004540.1-201ENST00000439120 RASGRF2O14827 1237 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 CEACAM4O75871 244 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 VAPBO95292 243 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 IGHEP01854 428 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 ALAS2P22557 587 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 TERF1P54274 439 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 SARNPP82979 210 aaKnown RBP17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 CDK16Q00536 496 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 SSPNQ14714 243 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 NADK2Q4G0N4 442 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 NKAIN1Q4KMZ8 207 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 PAPD7Q5XG87 772 aaKnown RBP17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 ZNF662Q6ZS27 426 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 MRGPREQ86SM8 312 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 HPS6Q86YV9 775 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 CLEC1AQ8NC01 280 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 CPT1CQ8TCG5 803 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 RAD51AP1Q96B01 352 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 FER1L6-AS2Q96M78 137 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 IL17FQ96PD4 163 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 SYBUQ9NX95 663 aa17.75■□□□□ 0.43
AC004540.1-201ENST00000439120 H3BMH7 237 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 KLF7O75840 302 aaPredicted RBP17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 CTSBP07858 339 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 TPSB2P20231 275 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 RPS3P23396 243 aaKnown RBP eCLIP17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 CXCR5P32302 372 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 CD97P48960 835 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 ARSFP54793 590 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 RAPSNQ13702 412 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 TPSAB1Q15661 275 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 ZC3H12BQ5HYM0 836 aaKnown RBP17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 RNF187Q5TA31 235 aaPredicted RBP17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 LRRC8BQ6P9F7 803 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 MCATQ8IVS2 390 aaKnown RBP17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 LMNTD1Q8N9Z9 388 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 OR2Y1Q8NGV0 311 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 MAGEC3Q8TD91 643 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 NUDT9Q9BW91 350 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 P2RY12Q9H244 342 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 MRM3Q9HC36 420 aaKnown RBP17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 SLAMF7Q9NQ25 335 aa17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 SNRNP200O75643 2136 aaKnown RBP17.74■□□□□ 0.43
AC004540.1-201ENST00000439120 H3BMM5 538 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 PIM1P11309 404 aaPredicted RBP17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 PAMP19021 973 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 CCNFP41002 786 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 VPS41P49754 854 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 GRB7Q14451 532 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 TRIP13Q15645 432 aaPredicted RBP17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 CYP2A13Q16696 494 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 CASC4Q6P4E1 433 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 CNSTQ6PJW8 725 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 FIGLAQ6QHK4 219 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 CES3Q6UWW8 571 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 TTLL10Q6ZVT0 673 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 FAM26EQ8N5C1 309 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 PTERQ96BW5 349 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 MFSD3Q96ES6 412 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 MENTQ9BUN1 341 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 KIFC1Q9BW19 673 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 MFRPQ9BY79 579 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 SAMD15Q9P1V8 674 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 MAP10Q9P2G4 905 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 ANKMY1Q9P2S6 941 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 TSR3Q9UJK0 312 aaKnown RBP17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 MED13Q9UHV7 2174 aa17.73■□□□□ 0.43
AC004540.1-201ENST00000439120 A0A1B0GX78 115 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 GOLGA8KD6RF30 607 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 GOLGA8TH3BQL2 631 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 KLHL41O60662 606 aa17.72■□□□□ 0.43
AC004540.1-201ENST00000439120 FKBP9O95302 570 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms