RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 IGHV4-31P0DP07 118 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 SAT1P21673 171 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 RPL21P46778 160 aaKnown RBP2.89□□□□□ -1.95
CLK1-204ENST00000432425 RXRGP48443 463 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 CHAF1BQ13112 559 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 DRP2Q13474 957 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 UGP2Q16851 508 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 C15orf59Q2T9L4 293 aaPredicted RBP2.89□□□□□ -1.95
CLK1-204ENST00000432425 PHLDA2Q53GA4 152 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 KLHL26Q53HC5 615 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 ARMC3Q5W041 872 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 DCLK2Q8N568 766 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 NPEPL1Q8NDH3 523 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 USP28Q96RU2 1077 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 KRT12Q99456 494 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 PKP2Q99959 881 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 CPVLQ9H3G5 476 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 ATP13A3Q9H7F0 1226 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 PPANQ9NQ55 473 aaKnown RBP2.89□□□□□ -1.95
CLK1-204ENST00000432425 DAPK2Q9UIK4 370 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 PTRH2Q9Y3E5 179 aaKnown RBP2.89□□□□□ -1.95
CLK1-204ENST00000432425 FSD2A1L4K1 749 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 KPNA7A9QM74 516 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 IPO8O15397 1037 aaKnown RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 CLDN1O95832 211 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 BCL10O95999 233 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 TRIM21P19474 475 aaKnown RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 COPB2P35606 906 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 MNDAP41218 407 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 PAX9P55771 341 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 MAZP56270 477 aaKnown RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 HUNKP57058 714 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 SQLEQ14534 574 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 C2CD6Q53TS8 623 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 TEX38Q6PEX7 206 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 IL27RAQ6UWB1 636 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 PTAR1Q7Z6K3 402 aaPredicted RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 RTN4RL2Q86UN3 420 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 EID3Q8N140 333 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 GUF1Q8N442 669 aaKnown RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 GPRC5AQ8NFJ5 357 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 OR13C3Q8NGS6 347 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 OR52N5Q8NH56 324 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 EXD1Q8NHP7 514 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 PTPMT1Q8WUK0 201 aaPredicted RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 NSMCE3Q96MG7 304 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 MS4A10Q96PG2 267 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 SDF4Q9BRK5 362 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 TEX12Q9BXU0 123 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 UPF3AQ9H1J1 476 aaKnown RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 SERINC1Q9NRX5 453 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 GKN1Q9NS71 199 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 P4HTMQ9NXG6 502 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 DPP3Q9NY33 737 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 OR6C2Q9NZP2 312 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 PPP1R3CQ9UQK1 317 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 OR10H2O60403 315 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 HSPA8P11142 646 aaKnown RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 CDH3P22223 829 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 CALRP27797 417 aaKnown RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 MMP12P39900 470 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 CLNS1AP54105 237 aaKnown RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 KRTAP10-3P60369 221 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 WTAPQ15007 396 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 ODF4Q2M2E3 257 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 ALDH1L2Q3SY69 923 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 PDLIM3Q53GG5 364 aaPredicted RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 TMEM211Q6ICI0 200 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 TAGAPQ8N103 731 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 OR11H4Q8NGC9 324 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 OR10G8Q8NGN5 311 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 VANGL1Q8TAA9 524 aaPredicted RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 LPGAT1Q92604 370 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 CALML4Q96GE6 196 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 BARD1Q99728 777 aaKnown RBP2.88□□□□□ -1.95
CLK1-204ENST00000432425 GHITMQ9H3K2 345 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 VPS28Q9UK41 221 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 MOB4Q9Y3A3 225 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 AGRNO00468 2067 aa2.88□□□□□ -1.95
CLK1-204ENST00000432425 GPR75-ASB3A0A0A6YYF3 556 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 MEIS2O14770 477 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 ADAMDEC1O15204 470 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 MAGEC1O60732 1142 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 UGT1A4P22310 534 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 HNF4AP41235 474 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 NOVP48745 357 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 STAT2P52630 851 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 GRAPQ13588 217 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 ENPP2Q13822 863 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 NECTIN1Q15223 517 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 NTRK2Q16620 822 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 SNAI3Q3KNW1 292 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 GLIPR1L2Q4G1C9 344 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 RNASEH2BQ5TBB1 312 aaKnown RBP2.87□□□□□ -1.95
CLK1-204ENST00000432425 SPINK14Q6IE38 97 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 ADIPOR2Q86V24 386 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 NUDT13Q86X67 352 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 SPAG16Q8N0X2 631 aa2.87□□□□□ -1.95
CLK1-204ENST00000432425 APPL2Q8NEU8 664 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms